RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 FCN3O75636 299 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 NDUFA3O95167 84 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 SNAPINO95295 136 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 BRI3O95415 125 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CXorf1O96002 111 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 IGLV2-23P01705 113 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 HLA-DRB1P01911 266 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 OPN1MWP04001 364 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CD5P06127 495 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CRYGCP07315 174 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CRYGBP07316 175 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 OPN1MW2P0DN77 364 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 OPN1MW3P0DN78 364 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RNASE2P10153 161 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 HNF1AP20823 631 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 MDKP21741 143 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 LEPP41159 167 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RAB9AP51151 201 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 B2MP61769 119 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 FXYD3Q14802 87 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 GUK1Q16774 197 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 C5orf64Q2M2E5 130 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 AKIRIN2Q53H80 203 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 KHDC3LQ587J8 217 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 SOHLH1Q5JUK2 328 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM74A1Q5RGS3 127 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CYB5R2Q6BCY4 276 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC35E3Q7Z769 313 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 NECAP1Q8NC96 275 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 BPIFCQ8NFQ6 507 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 OR4X1Q8NH49 305 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 Q8WTZ3 238 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 SRSF12Q8WXF0 261 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 CHCHD10Q8WYQ3 142 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 ARPC1AQ92747 370 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RPUSD4Q96CM3 377 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RBM14Q96PK6 669 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TBX15Q96SF7 602 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TRGV9Q99603 122 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TCEAL7Q9BRU2 100 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 SEC11CQ9BY50 192 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 MRPL32Q9BYC8 188 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 REG4Q9BYZ8 158 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 FBXL15Q9H469 300 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 WFDC1Q9HC57 220 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TREM1Q9NP99 234 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM167BQ9NRX6 74 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 RPRMQ9NS64 109 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 F11RQ9Y624 299 aaKnown RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 ARL2-SNX15V9GYD0 113 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 FLNCQ14315 2725 aa1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 NCOA6Q14686 2063 aaPredicted RBP1.67□□□□□ -2.14
TOPBP1-205ENST00000506779 DMXL2Q8TDJ6 3036 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 MED12Q93074 2177 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CELSR3Q9NYQ7 3312 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 POLQO75417 2590 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 AKAP13Q12802 2813 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 TRBV7-1A0A0A6YYK4 115 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHV3-72A0A0B4J1Y9 119 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1W2PRD5 423 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1W2PRF3 423 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 A0A1W2PRM7 423 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 TCRBV4S1A1TA0A5B7 111 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 IGLC7A0M8Q6 106 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 MAP1LC3B2A6NCE7 125 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM223BA6NKX1 122 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SEC14L6B5MCN3 397 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 TMEM250H0YL14 139 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 H3BUA1 57 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 NUPL2O15504 423 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 GNG7O60262 68 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 COX7A2P2O60397 106 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 HYPMO75409 117 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 IGHG4P01861 327 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 APOC3P02656 99 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 S100A9P06702 114 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SFTA3P0C7M3 94 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 LINC00869P0C866 280 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RD3LP0DJH9 198 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 C8orf88P0DMB2 117 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 BCL2P10415 239 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CTRB1P17538 263 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 OR10J1P30954 320 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CDC34P49427 236 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 YPEL3P61236 119 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SLC35B1P78383 322 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RPL19P84098 196 aaKnown RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RUNX1Q01196 453 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 DEFA5Q01523 94 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 MEF2BQ02080 365 aaPredicted RBP1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 WT1-ASQ06250 92 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 DIAPH2-AS1Q14236 149 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 RHEBQ15382 184 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 SPINK9Q5DT21 86 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 C10orf91Q5T1B1 145 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 FAM78BQ5VT40 261 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 C10orf113Q5VZT2 155 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 CTRB2Q6GPI1 263 aa1.66□□□□□ -2.14
TOPBP1-205ENST00000506779 HCP5Q6MZN7 132 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms