RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 NBEAP1P0C6P0 100 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 M6PRP20645 277 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 CNN1P51911 297 aaKnown RBP5.3□□□□□ -1.56
GYPB-206ENST00000506516 DEFB1P60022 68 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 SERF2P84101 59 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 PDE6HQ13956 83 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 MIR17HGQ75NE6 70 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 HSD17B11Q8NBQ5 300 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 OR10J6PQ8NGY7 276 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 BLNKQ8WV28 456 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 RPUSD4Q96CM3 377 aaKnown RBP5.3□□□□□ -1.56
GYPB-206ENST00000506516 GNPNAT1Q96EK6 184 aaPredicted RBP5.3□□□□□ -1.56
GYPB-206ENST00000506516 SAT2Q96F10 170 aaPredicted RBP5.3□□□□□ -1.56
GYPB-206ENST00000506516 PAXXQ9BUH6 204 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 MFFQ9GZY8 342 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 AAMDCQ9H7C9 122 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 ZNF586Q9NXT0 402 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 XCL2Q9UBD3 114 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 PRELID1Q9Y255 219 aa5.3□□□□□ -1.56
GYPB-206ENST00000506516 NBEAL2Q6ZNJ1 2754 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 A0A0J9YWU9 116 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 RNF222A6NCQ9 220 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 H3BTX0 84 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 ARPC5O15511 151 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR7C2O60412 319 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 JTBO76095 146 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 AMBPP02760 352 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 GIG44P09565 113 aaPredicted RBP5.29□□□□□ -1.56
GYPB-206ENST00000506516 PYYP10082 97 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 MIFP14174 115 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 C4BPBP20851 252 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 ATP6V0CP27449 155 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 HLA-DMBP28068 263 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 FXYD7P58549 80 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 ODF1Q14990 250 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 KHDC3LQ587J8 217 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR8A1Q8NGG7 326 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR10G4Q8NGN3 311 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR10G9Q8NGN4 311 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR10G7Q8NGN6 311 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 OR2G3Q8NGZ4 309 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 MRPL53Q96EL3 112 aaKnown RBP5.29□□□□□ -1.56
GYPB-206ENST00000506516 PSMG3Q9BT73 122 aaPredicted RBP5.29□□□□□ -1.56
GYPB-206ENST00000506516 SLC25A2Q9BXI2 301 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 GOLT1BQ9Y3E0 138 aa5.29□□□□□ -1.56
GYPB-206ENST00000506516 A0A0D9SG52 128 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 SMIM9A6NGZ8 99 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 HMSDA8MTL9 139 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 A8MTW9 85 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 ZNF705FA8MVS1 300 aaPredicted RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 ZNF705EA8MWA4 302 aaPredicted RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 SLC17A3O00476 420 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 ZNF705DP0CH99 300 aaPredicted RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 ZNF705BP0CI00 300 aaPredicted RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 HIST1H1AQ02539 215 aaPredicted RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 RPL7L1Q6DKI1 246 aaKnown RBP5.28□□□□□ -1.56
GYPB-206ENST00000506516 PQLC2Q6ZP29 291 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 LYPD1Q8N2G4 141 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 FAM167A-AS1Q96KT0 104 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 TMEM208Q9BTX3 173 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 SLC35B3Q9H1N7 401 aa5.28□□□□□ -1.56
GYPB-206ENST00000506516 IGHV3OR16-12A0A075B7B8 117 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 KANTRA0A1W2PQU2 76 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 C9orf118A6NHY6 69 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 G3V3Q6 166 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 SMLR1H3BR10 107 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 NDUFB4O95168 129 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 OR10J4P0C629 311 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 TSPOP30536 169 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 CSN1S1P47710 185 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 RANP62826 216 aaKnown RBP5.27□□□□□ -1.57
GYPB-206ENST00000506516 UBE2L3P68036 154 aaKnown RBP5.27□□□□□ -1.57
GYPB-206ENST00000506516 ZNF345Q14585 488 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 ICAM4Q14773 271 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 SPINK13Q1W4C9 94 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 FAM74A1Q5RGS3 127 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 CASC10Q5T4H9 136 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 ZFAND6Q6FIF0 208 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 FAM122CQ6P4D5 195 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 AMTNQ6UX39 209 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 Q6ZNX1 250 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 EXOC3-AS1Q8N2X6 119 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 KCNRGQ8N5I3 272 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 C11orf45Q8TAV5 145 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 FXYD5Q96DB9 178 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 IGF2BP2-AS1Q96M15 143 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 NEU1Q99519 415 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 ARPC5LQ9BPX5 153 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 ACTR3CQ9C0K3 210 aaPredicted RBP5.27□□□□□ -1.57
GYPB-206ENST00000506516 C11orf68Q9H3H3 251 aaKnown RBP5.27□□□□□ -1.57
GYPB-206ENST00000506516 RFNGQ9Y644 331 aa5.27□□□□□ -1.57
GYPB-206ENST00000506516 IGHV4-28A0A0C4DH34 117 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 TMEM189A5PLL7 270 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 CXorf65A6NEN9 183 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 PRAC2D3DTV9 90 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 BOLA2-SMG1P6H3BVE0 249 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 INSP01308 110 aa5.26□□□□□ -1.57
GYPB-206ENST00000506516 STAG3L2P0CL84 134 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms