RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 BAP18Q8IXM2 172 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 HSD17B11Q8NBQ5 300 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 C11orf45Q8TAV5 145 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 IGF2BP2-AS1Q96M15 143 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 NEU1Q99519 415 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 CELA1Q9UNI1 258 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 TIMM9Q9Y5J7 89 aa12.83□□□□□ -0.36
SMN1-204ENST00000506163 NBEAP1P0C6P0 100 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RAB2AP61019 212 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RHOBP62745 196 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 RNF141Q8WVD5 230 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 PAXXQ9BUH6 204 aa12.82□□□□□ -0.36
SMN1-204ENST00000506163 BOLA2-SMG1P6H3BVE0 249 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 ATP6V0CP27449 155 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 PDE6HQ13956 83 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 RPL7L1Q6DKI1 246 aaKnown RBP12.81□□□□□ -0.36
SMN1-204ENST00000506163 RYR2Q92736 4967 aa12.81□□□□□ -0.36
SMN1-204ENST00000506163 CT45A10P0DMU9 189 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 M6PRP20645 277 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 ZNF266Q14584 549 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 CEMP1Q6PRD7 247 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 PHLDA1Q8WV24 401 aaPredicted RBP12.8□□□□□ -0.36
SMN1-204ENST00000506163 PHYHIPLQ96FC7 376 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 SH3BGRL3Q9H299 93 aa12.8□□□□□ -0.36
SMN1-204ENST00000506163 OR7C2O60412 319 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ERCC8Q13216 396 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ACOT6Q3I5F7 207 aaPredicted RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR11H4Q8NGC9 324 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR2G3Q8NGZ4 309 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 MRPL53Q96EL3 112 aaKnown RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 GOLT1BQ9Y3E0 138 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 SMIM9A6NGZ8 99 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 ICAM4Q14773 271 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 RPP25LQ8N5L8 163 aaKnown RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G4Q8NGN3 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10G7Q8NGN6 311 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
SMN1-204ENST00000506163 PSMG3Q9BT73 122 aaPredicted RBP12.79□□□□□ -0.36
SMN1-204ENST00000506163 LCE6AA0A183 80 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
SMN1-204ENST00000506163 HMGB3O15347 200 aaKnown RBP12.78□□□□□ -0.36
SMN1-204ENST00000506163 ARPC5O15511 151 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 INSP01308 110 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 AMBPP02760 352 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 FAM122CQ6P4D5 195 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 ZNF767PQ75MW2 155 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 CYTL1Q9NRR1 136 aa12.78□□□□□ -0.36
SMN1-204ENST00000506163 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.36
SMN1-204ENST00000506163 HYDINQ4G0P3 5121 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 CDKN1BP46527 198 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 EMP1P54849 157 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 UBE2L3P68036 154 aaKnown RBP12.77□□□□□ -0.37
SMN1-204ENST00000506163 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 AGPAT4-IT1Q9H0P7 198 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PPP1R14DQ9NXH3 145 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 PRELID1Q9Y255 219 aa12.77□□□□□ -0.37
SMN1-204ENST00000506163 ALMS1Q8TCU4 4167 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 NUPR2A6NF83 97 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 AZU1P20160 251 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
SMN1-204ENST00000506163 Q6ZTC4 211 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 VGLL1Q99990 258 aa12.76□□□□□ -0.37
SMN1-204ENST00000506163 IGKV2-40A0A087WW87 121 aaPredicted RBP12.75□□□□□ -0.37
SMN1-204ENST00000506163 A0A1W2PPV4 95 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 IGKV2D-40P01614 121 aaPredicted RBP12.75□□□□□ -0.37
SMN1-204ENST00000506163 HBE1P02100 147 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 TAS2R45P59539 299 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 SSX7Q7RTT5 188 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 FAM19A4Q96LR4 140 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 TMEM208Q9BTX3 173 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 Q9H3A6 140 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 AAMDCQ9H7C9 122 aa12.75□□□□□ -0.37
SMN1-204ENST00000506163 LOC102723971A0A1B0GUV8 181 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 SERF2P84101 59 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 RRN3P1Q2M238 152 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 GFI1BQ5VTD9 330 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 DKK2Q9UBU2 259 aa12.74□□□□□ -0.37
SMN1-204ENST00000506163 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 PLAC8L1A1L4L8 177 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 J3KRW8 73 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 Q6ZNX1 250 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 ODF3Q96PU9 254 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 LINC01587Q99440 93 aa12.73□□□□□ -0.37
SMN1-204ENST00000506163 YTHDF2Q9Y5A9 579 aaKnown RBP12.73□□□□□ -0.37
SMN1-204ENST00000506163 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 STAG3L2P0CL84 134 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 STAG3L3P0CL85 134 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 ARL14EPLP0DKL9 152 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 CDC34P49427 236 aaPredicted RBP12.72□□□□□ -0.37
SMN1-204ENST00000506163 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
SMN1-204ENST00000506163 ST6GAL2Q96JF0 529 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms