RNA–Protein interactions for RNA: ENST00000505884.5

CCND3-209, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-209ENST00000505884 LYRM9A8MSI8 78 aa12.85□□□□□ -0.35
CCND3-209ENST00000505884 F5H768 121 aa12.85□□□□□ -0.35
CCND3-209ENST00000505884 IFITM3Q01628 133 aa12.85□□□□□ -0.35
CCND3-209ENST00000505884 NHLH2Q02577 135 aa12.85□□□□□ -0.35
CCND3-209ENST00000505884 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
CCND3-209ENST00000505884 SAT2Q96F10 170 aaPredicted RBP12.85□□□□□ -0.35
CCND3-209ENST00000505884 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 RPL29P47914 159 aaKnown RBP12.84□□□□□ -0.35
CCND3-209ENST00000505884 TAS2R60P59551 318 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 HBG1P69891 147 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 HBG2P69892 147 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 BLNKQ8WV28 456 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 FAM210BQ96KR6 192 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 PFDN5Q99471 154 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 NOP10Q9NPE3 64 aaKnown RBP12.84□□□□□ -0.35
CCND3-209ENST00000505884 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
CCND3-209ENST00000505884 UPK1BO75841 260 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 CT45A10P0DMU9 189 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 PYYP10082 97 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 TSPOP30536 169 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 GFI1BQ5VTD9 330 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
CCND3-209ENST00000505884 TRAV12-3A0A0B4J271 114 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 M0R3E3 92 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 RTL8CO15255 209 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 NUDT3O95989 172 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 ERCC8Q13216 396 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 CLINT1Q14677 625 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 OR5C1Q8NGR4 320 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
CCND3-209ENST00000505884 FAT2Q9NYQ8 4349 aa12.81□□□□□ -0.36
CCND3-209ENST00000505884 PRSS29PA6NIE9 313 aa12.81□□□□□ -0.36
CCND3-209ENST00000505884 ATP6V1FQ16864 119 aa12.81□□□□□ -0.36
CCND3-209ENST00000505884 EXOC3-AS1Q8N2X6 119 aa12.81□□□□□ -0.36
CCND3-209ENST00000505884 NPCDR1Q9BY65 106 aa12.81□□□□□ -0.36
CCND3-209ENST00000505884 TIMM8BQ9Y5J9 83 aaPredicted RBP12.81□□□□□ -0.36
CCND3-209ENST00000505884 H0YIZ8 118 aa12.8□□□□□ -0.36
CCND3-209ENST00000505884 H7BYZ3 331 aa12.8□□□□□ -0.36
CCND3-209ENST00000505884 LINC00299Q6ZSB3 139 aa12.8□□□□□ -0.36
CCND3-209ENST00000505884 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
CCND3-209ENST00000505884 ATG101Q9BSB4 218 aa12.8□□□□□ -0.36
CCND3-209ENST00000505884 TIMM9Q9Y5J7 89 aa12.8□□□□□ -0.36
CCND3-209ENST00000505884 TRBV19A0A075B6N1 114 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 INMT-MINDY4F8WBC2 141 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 NDUFB4O95168 129 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 RLN2P04090 185 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 ATP5G1P05496 136 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 ATP5G3P48201 142 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 GUK1Q16774 197 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 MIR17HGQ75NE6 70 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
CCND3-209ENST00000505884 SLC25A2Q9BXI2 301 aa12.79□□□□□ -0.36
CCND3-209ENST00000505884 DNAH17Q9UFH2 4485 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 CBY3A6NI87 242 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 E5RGE8 158 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 NPIPB6E9PJ23 425 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 LEPP41159 167 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 OR5I1Q13606 314 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 LGALS9BQ3B8N2 356 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 RNF212Q495C1 297 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 LINC00336Q6ZUF6 198 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 CCDC28AQ8IWP9 274 aa12.78□□□□□ -0.36
CCND3-209ENST00000505884 A0A1B0GVY2 172 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 GAGE12BA1L429 117 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 GAGE7O76087 117 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 GAGE12FP0CL80 117 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 GAGE12GP0CL81 117 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 GAGE12IP0CL82 117 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 FAM122CQ6P4D5 195 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 C15orf53Q8NAA6 179 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 NMES1Q9C002 83 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 SLC25A31Q9H0C2 315 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 PTTG2Q9NZH5 202 aa12.77□□□□□ -0.37
CCND3-209ENST00000505884 IGKV2-40A0A087WW87 121 aaPredicted RBP12.76□□□□□ -0.37
CCND3-209ENST00000505884 A0A0J9YY99 117 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 IGKV2D-40P01614 121 aaPredicted RBP12.76□□□□□ -0.37
CCND3-209ENST00000505884 OR10J4P0C629 311 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 HIST1H1EP10412 219 aaKnown RBP12.76□□□□□ -0.37
CCND3-209ENST00000505884 H2BFSP57053 126 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 ICAM4Q14773 271 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 ZNF493Q6ZR52 646 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 Q6ZR54 194 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 CHAC2Q8WUX2 184 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 RNF141Q8WVD5 230 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 TMEM14CQ9P0S9 112 aa12.76□□□□□ -0.37
CCND3-209ENST00000505884 SSNA1O43805 119 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 MPDU1O75352 247 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 EIF3GO75821 320 aaKnown RBP eCLIP12.75□□□□□ -0.37
CCND3-209ENST00000505884 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
CCND3-209ENST00000505884 CD300CQ08708 224 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 BTN1A1Q13410 526 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 C20orf144Q9BQM9 153 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 SMIM3Q9BZL3 60 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 AGPAT4-IT1Q9H0P7 198 aa12.75□□□□□ -0.37
CCND3-209ENST00000505884 SNURFLB1AK76 121 aa12.74□□□□□ -0.37
CCND3-209ENST00000505884 PRAF2O60831 178 aa12.74□□□□□ -0.37
CCND3-209ENST00000505884 ZNF253O75346 499 aa12.74□□□□□ -0.37
CCND3-209ENST00000505884 Q6ZQT7 251 aa12.74□□□□□ -0.37
CCND3-209ENST00000505884 PPP1R1CQ8WVI7 109 aa12.74□□□□□ -0.37
CCND3-209ENST00000505884 FAM167A-AS1Q96KT0 104 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms