RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 ZNF726P1Q15940 193 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 LYPD1Q8N2G4 141 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 EXOC3-AS1Q8N2X6 119 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 OR10J6PQ8NGY7 276 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 RPUSD4Q96CM3 377 aaKnown RBP6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 CITED4Q96RK1 184 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 Q9H3A6 140 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 TMPRSS5Q9H3S3 457 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 SAV1Q9H4B6 383 aaPredicted RBP6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 PRELID1Q9Y255 219 aa6.09□□□□□ -1.43
LIMCH1-206ENST00000505705 NOTCH3Q9UM47 2321 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 A8MZ25 164 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 F6UB75 175 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 DUSP14O95147 198 aaKnown RBP6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 NDUFB4O95168 129 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 ZNF705DP0CH99 300 aaPredicted RBP6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 ZNF705BP0CI00 300 aaPredicted RBP6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 APOC4P55056 127 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 DEFB1P60022 68 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 UBE2G2P60604 165 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 NUTF2P61970 127 aaKnown RBP6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 HIST1H1AQ02539 215 aaPredicted RBP6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 ASCL2Q99929 193 aa6.08□□□□□ -1.44
LIMCH1-206ENST00000505705 A0A0J9YX75 114 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 RBMY1BA6NDE4 496 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 RBMY1EA6NEQ0 496 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 H3BMM0 161 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 M0R3E3 92 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 HBE1P02100 147 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 SLC25A5P05141 298 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 RBMY1DP0C7P1 496 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 HLA-DRB4P13762 266 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 PPT1P50897 306 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 SUMO1P63165 101 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 BLOC1S1P78537 153 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 CST9LP1Q5W188 147 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 OR8A1Q8NGG7 326 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 RXFP4Q8TDU9 374 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 MBD3L1Q8WWY6 194 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 MRPL53Q96EL3 112 aaKnown RBP6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 CSTL1Q9H114 145 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 OTORQ9NRC9 128 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 HLA-DRB4X5D2U9 266 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 SORL1Q92673 2214 aa6.07□□□□□ -1.44
LIMCH1-206ENST00000505705 PKD1L1Q8TDX9 2849 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 PRAC2D3DTV9 90 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 CA1P00915 261 aaPredicted RBP6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 IFNA7P01567 189 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 CNN1P51911 297 aaKnown RBP6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 FXYD7P58549 80 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 HAGHQ16775 308 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 MORN3Q6PF18 240 aaPredicted RBP6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 TEX261Q6UWH6 196 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 TRPT1Q86TN4 253 aaKnown RBP6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 SBSPONQ8IVN8 264 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 NKX6-2Q9C056 277 aaPredicted RBP6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 ZMAT4Q9H898 229 aa6.06□□□□□ -1.44
LIMCH1-206ENST00000505705 IGKV2-40A0A087WW87 121 aaPredicted RBP6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 KIR2DL5BA0A0G2JN68 375 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 KIR2DL5BA0A0G2JPC4 375 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 A0A1W2PRE2 83 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 K7EQM0 130 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 PAGE4O60829 102 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 IFNA1P01562 189 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 IGKV2D-40P01614 121 aaPredicted RBP6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 GNG5P63218 68 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 ERCC8Q13216 396 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 TMEM78Q5T7P6 136 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 KIR2DL5AQ8N109 375 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 KIR2DL5BQ8NHK3 375 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 SUN5Q8TC36 379 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 LINC00477Q96M19 166 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 B9D2Q9BPU9 175 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 C1QTNF4Q9BXJ3 329 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
LIMCH1-206ENST00000505705 FAM74A7A6NL05 159 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 DIRC3C9JPN6 131 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 F6UZH7 168 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 J3KRW8 73 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 UBE2CO00762 179 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 LINC00322Q6ZN03 302 aaPredicted RBP6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 GOLT1AQ6ZVE7 132 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 C5orf17Q8NAS9 161 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 ZNF680Q8NEM1 530 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 SLC35B3Q9H1N7 401 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 MANBALQ9NQG1 85 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 XCL2Q9UBD3 114 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 YTHDF2Q9Y5A9 579 aaKnown RBP6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 DNAH3Q8TD57 4116 aa6.04□□□□□ -1.44
LIMCH1-206ENST00000505705 IGHV3OR16-12A0A075B7B8 117 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 TRAV1-1A0A0B4J248 108 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 SERTM2A0A1B0GWG4 89 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 RBAKDNA6NC62 111 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 GGTLC3B5MD39 225 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 C11orf94C9JXX5 98 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 M0R2Z0 102 aa6.03□□□□□ -1.44
LIMCH1-206ENST00000505705 TCRAP04437 139 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms