RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 MED13LQ71F56 2210 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 GRIFINA4D1Z8 144 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 TGFAP01135 160 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 PMCHP20382 165 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 CFHR3Q02985 330 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 NOL4LQ96MY1 436 aaPredicted RBP8.74□□□□□ -1.01
NFKB1-205ENST00000505458 K7EMT4 169 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 PF4V1P10720 104 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 LINC00322Q6ZN03 302 aaPredicted RBP8.74□□□□□ -1.01
NFKB1-205ENST00000505458 TCF24Q7RTU0 167 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 GTSF1Q8WW33 167 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 PGLYRP4Q96LB8 373 aa8.74□□□□□ -1.01
NFKB1-205ENST00000505458 GZMBP10144 247 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 SRSF1Q07955 248 aaKnown RBP eCLIP8.73□□□□□ -1.01
NFKB1-205ENST00000505458 GLMPQ8WWB7 406 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 IGHG4P01861 327 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 HIST1H1AQ02539 215 aaPredicted RBP8.73□□□□□ -1.01
NFKB1-205ENST00000505458 NPFFR1Q9GZQ6 430 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 VPREB3Q9UKI3 123 aa8.73□□□□□ -1.01
NFKB1-205ENST00000505458 IGHV4-31P0DP07 118 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 CAMPP49913 170 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 SLAQ13239 276 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 FOXE3Q13461 319 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 FAM106AQ4KMX7 169 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 CHCHD1Q96BP2 118 aaKnown RBP8.72□□□□□ -1.01
NFKB1-205ENST00000505458 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
NFKB1-205ENST00000505458 CFAP46Q8IYW2 2715 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 FABP5P3A8MUU1 101 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 Q5PR19 223 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 BCL6BQ8N143 479 aaPredicted RBP8.72□□□□□ -1.01
NFKB1-205ENST00000505458 C18orf32Q8TCD1 76 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 TP53TG3Q9ULZ0 132 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 USP9XQ93008 2570 aaPredicted RBP8.72□□□□□ -1.01
NFKB1-205ENST00000505458 TRBV7-9A0A0J9YWB2 115 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 OVOL1O14753 267 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 SH2D1AO60880 128 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 ZNF324O75467 553 aaPredicted RBP8.72□□□□□ -1.01
NFKB1-205ENST00000505458 DEFB112Q30KQ8 113 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
NFKB1-205ENST00000505458 IGKV2-40A0A087WW87 121 aaPredicted RBP8.71□□□□□ -1.01
NFKB1-205ENST00000505458 IGKV2D-40P01614 121 aaPredicted RBP8.71□□□□□ -1.01
NFKB1-205ENST00000505458 GPX1P07203 203 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 C9orf47Q6ZRZ4 202 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 OR4X2Q8NGF9 303 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 UFC1Q9Y3C8 167 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 SPTAN1Q13813 2472 aaKnown RBP8.71□□□□□ -1.01
NFKB1-205ENST00000505458 LRBAP50851 2863 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 A1L4Q6 167 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 LINC00469Q8N7U9 141 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 NAGKQ9UJ70 344 aa8.71□□□□□ -1.01
NFKB1-205ENST00000505458 LOC102724200A0A096LPH7 203 aaPredicted RBP8.71□□□□□ -1.02
NFKB1-205ENST00000505458 AVPP01185 164 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 APOHP02749 345 aaPredicted RBP8.71□□□□□ -1.02
NFKB1-205ENST00000505458 ELANEP08246 267 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 CTRLP40313 264 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 AMTP48728 403 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 ZNF138P52744 262 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 Q6YL49 198 aa8.71□□□□□ -1.02
NFKB1-205ENST00000505458 DAZ1Q9NQZ3 744 aaKnown RBP8.71□□□□□ -1.02
NFKB1-205ENST00000505458 PEF1Q9UBV8 284 aaKnown RBP8.71□□□□□ -1.02
NFKB1-205ENST00000505458 F2Z2F3 143 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 TMEM86BQ8N661 226 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 C16orf92Q96LL3 132 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 PRRC2AP48634 2157 aaKnown RBP8.7□□□□□ -1.02
NFKB1-205ENST00000505458 HSBP1O75506 76 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 LINC01559Q495D7 138 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 GPHB5Q86YW7 130 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 MYO18BQ8IUG5 2567 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 RNF223E7ERA6 249 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 NRGNQ92686 78 aa8.7□□□□□ -1.02
NFKB1-205ENST00000505458 IGHV3-35A0A0C4DH35 117 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 FRMD6-AS1P0C7T7 363 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 LINC00310P59036 64 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 IGHV7-4-1A0A0J9YVY3 117 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 OR5AL1P0C617 328 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 PSMB8P28062 276 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 CRIP1P50238 77 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 GDF5OSQ5U4N7 250 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 C8orf49Q96NF6 230 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 IGHV4-59P01825 116 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 BLCAPP62952 87 aa8.69□□□□□ -1.02
NFKB1-205ENST00000505458 ID1P41134 155 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 FER1L6-AS1Q8NA97 138 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 CNFNQ9BYD5 112 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 NRN1Q9NPD7 142 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 OR10J6PQ8NGY7 276 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 VGLL1Q99990 258 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 LINC00527Q9UJ94 153 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 ZNF462Q96JM2 2506 aa8.68□□□□□ -1.02
NFKB1-205ENST00000505458 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
NFKB1-205ENST00000505458 IGLC6P0CF74 106 aa8.67□□□□□ -1.02
NFKB1-205ENST00000505458 LAMTOR2Q9Y2Q5 125 aa8.67□□□□□ -1.02
NFKB1-205ENST00000505458 NUPR1O60356 82 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms