RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 RCHY1Q96PM5 261 aa8.17□□□□□ -1.1
VCAN-205ENST00000503923 TP53TG1Q9Y2A0 90 aa8.17□□□□□ -1.1
VCAN-205ENST00000503923 U3KQK5 164 aa8.17□□□□□ -1.1
VCAN-205ENST00000503923 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 UMAD1C9J7I0 102 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 CXorf1O96002 111 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 IGKV3-20P01619 116 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 ARL14EPLP0DKL9 152 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 CNN1P51911 297 aaKnown RBP8.16□□□□□ -1.1
VCAN-205ENST00000503923 DEFB135Q30KP9 77 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 SLC51BQ86UW2 128 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 EXOC3-AS1Q8N2X6 119 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 C9orf62Q8N4C0 152 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 PHYHIPLQ96FC7 376 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 RETNQ9HD89 108 aa8.16□□□□□ -1.1
VCAN-205ENST00000503923 A8MTW9 85 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 ZNF705FA8MVS1 300 aaPredicted RBP8.15□□□□□ -1.1
VCAN-205ENST00000503923 SPRY2O43597 315 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 GCHFRP30047 84 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 RANP62826 216 aaKnown RBP8.15□□□□□ -1.1
VCAN-205ENST00000503923 HIST1H1AQ02539 215 aaPredicted RBP8.15□□□□□ -1.1
VCAN-205ENST00000503923 ICAM4Q14773 271 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 ZNF726P1Q15940 193 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 EIF5AL1Q6IS14 154 aaKnown RBP8.15□□□□□ -1.1
VCAN-205ENST00000503923 SSX7Q7RTT5 188 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 RNF183Q96D59 192 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 C1QTNF4Q9BXJ3 329 aa8.15□□□□□ -1.1
VCAN-205ENST00000503923 NBEAL2Q6ZNJ1 2754 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 PRAC2D3DTV9 90 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 M0R3E3 92 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 GIG44P09565 113 aaPredicted RBP8.14□□□□□ -1.11
VCAN-205ENST00000503923 ZNF705DP0CH99 300 aaPredicted RBP8.14□□□□□ -1.11
VCAN-205ENST00000503923 ZNF705BP0CI00 300 aaPredicted RBP8.14□□□□□ -1.11
VCAN-205ENST00000503923 DPPA3Q6W0C5 159 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 OR10J6PQ8NGY7 276 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 SUN5Q8TC36 379 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 TMED6Q8WW62 240 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 OVOL2Q9BRP0 275 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 Q9H3A6 140 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 TMEM167BQ9NRX6 74 aa8.14□□□□□ -1.11
VCAN-205ENST00000503923 MAP1LC3B2A6NCE7 125 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 PRB4P10163 310 aaPredicted RBP8.13□□□□□ -1.11
VCAN-205ENST00000503923 CSN1S1P47710 185 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 FXYD7P58549 80 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 AMTNQ6UX39 209 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 IQCF2Q8IXL9 164 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 MAP1LC3BQ9GZQ8 125 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 SLC35B3Q9H1N7 401 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 OTORQ9NRC9 128 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 XCL2Q9UBD3 114 aa8.13□□□□□ -1.11
VCAN-205ENST00000503923 BOLA2-SMG1P6H3BVE0 249 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 AMBPP02760 352 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 FHITP49789 147 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 RAB5CP51148 216 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 NKX2-5P52952 324 aaPredicted RBP8.12□□□□□ -1.11
VCAN-205ENST00000503923 FGF8P55075 233 aaPredicted RBP8.12□□□□□ -1.11
VCAN-205ENST00000503923 CSNK1G2-AS1Q8NCQ2 148 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 CMTM2Q8TAZ6 248 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 FAM213BQ8TBF2 198 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 RXFP4Q8TDU9 374 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 RARRES2Q99969 163 aa8.12□□□□□ -1.11
VCAN-205ENST00000503923 TENM3Q9P273 2699 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 PGPA6NDG6 321 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 NPIPB6E9PJ23 425 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 SPINK13Q1W4C9 94 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 ARL6IP6Q8N6S5 226 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 MBD3L1Q8WWY6 194 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 ODF3Q96PU9 254 aa8.11□□□□□ -1.11
VCAN-205ENST00000503923 IGKV2-40A0A087WW87 121 aaPredicted RBP8.1□□□□□ -1.11
VCAN-205ENST00000503923 A0A1W2PRE2 83 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 RBAKDNA6NC62 111 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 DIRC3C9JPN6 131 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 M0R2Z0 102 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 IGKV2D-40P01614 121 aaPredicted RBP8.1□□□□□ -1.11
VCAN-205ENST00000503923 SLC25A5P05141 298 aaKnown RBP8.1□□□□□ -1.11
VCAN-205ENST00000503923 TSPOP30536 169 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 CDKN1BP46527 198 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 SULT1A2P50226 295 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 C9orf47Q6ZRZ4 202 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 IGF2BP2-AS1Q96M15 143 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 TMPRSS5Q9H3S3 457 aa8.1□□□□□ -1.11
VCAN-205ENST00000503923 ZNF705EA8MWA4 302 aaPredicted RBP8.09□□□□□ -1.11
VCAN-205ENST00000503923 INSP01308 110 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 H2AFB1P0C5Y9 115 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 CT45A10P0DMU9 189 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 LEPP41159 167 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 ERCC8Q13216 396 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 TMEM78Q5T7P6 136 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 C5orf17Q8NAS9 161 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
VCAN-205ENST00000503923 AGPAT4-IT1Q9H0P7 198 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms