RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 CYB5R2Q6BCY4 276 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 RPP21Q9H633 154 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 NPIPB6E9PJ23 425 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 SPINK4O60575 86 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 SLC35B1P78383 322 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 COX19Q49B96 90 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 HIST2H2BCQ6DN03 193 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 NUP35Q8NFH5 326 aa16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 MRPL18Q9H0U6 180 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-216ENST00000503742 SNURFLB1AK76 121 aa16.41■□□□□ 0.22
UBE2D3-216ENST00000503742 P01737 135 aa16.41■□□□□ 0.22
UBE2D3-216ENST00000503742 WDR73Q6P4I2 378 aa16.41■□□□□ 0.22
UBE2D3-216ENST00000503742 NAT8BQ9UHF3 227 aa16.41■□□□□ 0.22
UBE2D3-216ENST00000503742 VPREB3Q9UKI3 123 aa16.41■□□□□ 0.22
UBE2D3-216ENST00000503742 AMBPP02760 352 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 PRB4P10163 310 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 TMEM95Q3KNT9 176 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 C16orf54Q6UWD8 224 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 TMEM136Q6ZRR5 245 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 NEU1Q99519 415 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 IGHV3-66A0A0C4DH42 116 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 A0A0G2JLM5 398 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 NDUFA4O00483 81 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 ZNF207O43670 478 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 DDTP30046 118 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 ZC2HC1AQ96GY0 325 aa16.4■□□□□ 0.22
UBE2D3-216ENST00000503742 CHEK1O14757 476 aa16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 MT-ND6P03923 174 aa16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 MRPL54Q6P161 138 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 REC114Q7Z4M0 266 aa16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 GBGT1Q8N5D6 347 aa16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 WIPF2Q8TF74 440 aaPredicted RBP16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 DAZAP1Q96EP5 407 aaKnown RBP16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 CREBBPQ92793 2442 aa16.39■□□□□ 0.21
UBE2D3-216ENST00000503742 HIGD1CA8MV81 97 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 A8MWL6 223 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 IGHV3-11P01762 117 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 HLA-DMBP28068 263 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 RASL11AQ6T310 242 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 LCNL1Q6ZST4 164 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 OR4X2Q8NGF9 303 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 IGHV3OR16-13A0A075B7E8 117 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 IGHV3-74A0A0B4J1X5 117 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 IGFL4Q6B9Z1 124 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 UNQ9165/PRO28630Q6UXU0 137 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 OR4B1Q8NGF8 309 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 TMEM18Q96B42 140 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 C14orf144Q96I85 54 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 ASCL2Q99929 193 aa16.38■□□□□ 0.21
UBE2D3-216ENST00000503742 ZNF469Q96JG9 3925 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 IGKV2-40A0A087WW87 121 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 FBLL1A6NHQ2 334 aaKnown RBP16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 IGKV2D-40P01614 121 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 PSMB8P28062 276 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 LBHQ53QV2 105 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 SLC50A1Q9BRV3 221 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 GFRA4Q9GZZ7 299 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 IGHV3-49A0A0A0MS15 119 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 GZMBP10144 247 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 COX8CQ7Z4L0 72 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 GTSF1Q8WW33 167 aa16.37■□□□□ 0.21
UBE2D3-216ENST00000503742 CRIP1P50238 77 aa16.36■□□□□ 0.21
UBE2D3-216ENST00000503742 LCN12Q6JVE5 192 aa16.36■□□□□ 0.21
UBE2D3-216ENST00000503742 WFDC11Q8NEX6 87 aa16.36■□□□□ 0.21
UBE2D3-216ENST00000503742 TMEM89A2RUT3 159 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 FAM231BA6NCW3 169 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 HLA-DQA1P01909 254 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 TCF24Q7RTU0 167 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 GLMPQ8WWB7 406 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 ZNF705FA8MVS1 300 aaPredicted RBP16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 ATP5L2Q7Z4Y8 100 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 C8orf49Q96NF6 230 aa16.35■□□□□ 0.21
UBE2D3-216ENST00000503742 TEX15Q9BXT5 2789 aa16.34■□□□□ 0.21
UBE2D3-216ENST00000503742 HOXA3O43365 443 aaPredicted RBP16.34■□□□□ 0.21
UBE2D3-216ENST00000503742 TRAV8-2A0A0B4J237 113 aa16.33■□□□□ 0.21
UBE2D3-216ENST00000503742 A0A1B0GXF2 115 aa16.33■□□□□ 0.21
UBE2D3-216ENST00000503742 PRR25Q96S07 402 aa16.33■□□□□ 0.21
UBE2D3-216ENST00000503742 VGLL1Q99990 258 aa16.33■□□□□ 0.21
UBE2D3-216ENST00000503742 SAPCD1Q5SSQ6 148 aa16.33■□□□□ 0.2
UBE2D3-216ENST00000503742 GDF5OSQ5U4N7 250 aa16.33■□□□□ 0.2
UBE2D3-216ENST00000503742 OR2D3Q8NGH3 330 aa16.33■□□□□ 0.2
UBE2D3-216ENST00000503742 ZNF702PQ9H963 129 aa16.33■□□□□ 0.2
UBE2D3-216ENST00000503742 SMAD7O15105 426 aaKnown RBP16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 RAB4BP61018 213 aa16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 SSTP61278 116 aa16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 C8orf86Q6ZUL3 223 aa16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 NPFFR1Q9GZQ6 430 aa16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 MXRA5Q9NR99 2828 aa16.32■□□□□ 0.2
UBE2D3-216ENST00000503742 GRIFINA4D1Z8 144 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 RBAKDNA6NC62 111 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 CRISP2P16562 243 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 FOXA3P55318 350 aaPredicted RBP16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 C10orf99Q6UWK7 81 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 RBPMS2Q6ZRY4 209 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 RNF182Q8N6D2 247 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 MRPL53Q96EL3 112 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 PEF1Q9UBV8 284 aaKnown RBP16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 TP53TG3Q9ULZ0 132 aa16.31■□□□□ 0.2
UBE2D3-216ENST00000503742 A0A1B0GUS0 222 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms