RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 C9JQL5 133 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 H0YJW9 148 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 CLDN34H7C241 214 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 TFF1P04155 84 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 FABP1P07148 127 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 CT45A6P0DMU7 189 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 CT45A5P0DMU8 189 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 CT45A7P0DMV0 189 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 IGHV1-8P0DP01 117 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 ERCC8Q13216 396 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM241Q24JQ0 296 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 SPRNQ5BIV9 151 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 FAM201AQ5SY85 155 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM144Q7Z5S9 345 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 CBLN2Q8IUK8 224 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 IQCF2Q8IXL9 164 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 RPP25LQ8N5L8 163 aaKnown RBP3.78□□□□□ -1.8
NEDD4-203ENST00000502612 LEAP2Q969E1 77 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 SCRT1Q9BWW7 348 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 HINT2Q9BX68 163 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 TMEM167BQ9NRX6 74 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 INSIG2Q9Y5U4 225 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 PXMP4Q9Y6I8 212 aa3.78□□□□□ -1.8
NEDD4-203ENST00000502612 PTPRZ1P23471 2315 aaPredicted RBP3.78□□□□□ -1.8
NEDD4-203ENST00000502612 VCANP13611 3396 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 COLCA2A8K830 154 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 OOSP1A8MZH6 123 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 K7EMT4 169 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 M0R1W7 72 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 CA2P00918 260 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 IGHV3-7P01780 117 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 CRYBA1P05813 215 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 S100A9P06702 114 aaKnown RBP3.77□□□□□ -1.81
NEDD4-203ENST00000502612 STAG3L2P0CL84 134 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 STAG3L3P0CL85 134 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 SAA1P0DJI8 122 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-203ENST00000502612 CD99P14209 185 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 RAB5AP20339 215 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 LOXP28300 417 aaPredicted RBP3.77□□□□□ -1.81
NEDD4-203ENST00000502612 S100A7P31151 101 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 B2MP61769 119 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 CCL20P78556 96 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 TFF3Q07654 80 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 BSXQ3C1V8 233 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 CYP2G1PQ6ZSU1 146 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 TCF23Q7RTU1 214 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 VKORC1L1Q8N0U8 176 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 OR4P4Q8NGL7 312 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 LINC01560Q8TB33 94 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 RPEQ96AT9 228 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 PFDN5Q99471 154 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 NABP2Q9BQ15 211 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 SMIM7Q9BQ49 75 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 MRPL32Q9BYC8 188 aaKnown RBP3.77□□□□□ -1.81
NEDD4-203ENST00000502612 MRPL20Q9BYC9 149 aaKnown RBP3.77□□□□□ -1.81
NEDD4-203ENST00000502612 NDUFA4L2Q9NRX3 87 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 OTOGLQ3ZCN5 2332 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 AHCTF1Q8WYP5 2266 aa3.77□□□□□ -1.81
NEDD4-203ENST00000502612 MED13Q9UHV7 2174 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 IGKV2D-24A0A075B6R9 120 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 IGHV2-26A0A0B4J1V2 119 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 BUB1B-PAK6H3BSN5 160 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 ENSAO43768 121 aaKnown RBP3.76□□□□□ -1.81
NEDD4-203ENST00000502612 ZNF324O75467 553 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-203ENST00000502612 IGKV1-16P04430 117 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 S100A8P05109 93 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 CCL3L1P16619 93 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 HTR1DP28221 377 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 SRP14P37108 136 aaKnown RBP3.76□□□□□ -1.81
NEDD4-203ENST00000502612 ADIRFQ15847 76 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 SPINK9Q5DT21 86 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 SPNS3Q6ZMD2 512 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 FAM24BQ8N5W8 94 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 OR4C5Q8NGB2 326 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 HIST1H2BAQ96A08 127 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 EEF1AKMT3Q96AZ1 226 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 IMMP2LQ96T52 175 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 MGST2Q99735 147 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 GGTLC1Q9BX51 225 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 SAV1Q9H4B6 383 aaPredicted RBP3.76□□□□□ -1.81
NEDD4-203ENST00000502612 PRORYQ9H606 182 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 RPP21Q9H633 154 aaKnown RBP3.76□□□□□ -1.81
NEDD4-203ENST00000502612 VSIRQ9H7M9 311 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 DOK5Q9P104 306 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 LY96Q9Y6Y9 160 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 MED12LQ86YW9 2145 aa3.76□□□□□ -1.81
NEDD4-203ENST00000502612 ZNF407Q9C0G0 2248 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 CACNA1GO43497 2377 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 LAMA1P25391 3075 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 TRAV9-1A0A075B6T8 112 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 TRAV3A0A0B4J244 114 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 SERTM2A0A1B0GWG4 89 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 PPP5D1E7EU14 171 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 H7BYZ3 331 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 IGKV1D-33P01593 117 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 IGKV1-33P01594 117 aa3.75□□□□□ -1.81
NEDD4-203ENST00000502612 RNASE2P10153 161 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms