RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 SOCS3O14543 225 aa10.7□□□□□ -0.7
VPS26A-209ENST00000497564 OVOL1O14753 267 aa10.7□□□□□ -0.7
VPS26A-209ENST00000497564 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
VPS26A-209ENST00000497564 ATG101Q9BSB4 218 aa10.7□□□□□ -0.7
VPS26A-209ENST00000497564 MLXQ9UH92 298 aa10.7□□□□□ -0.7
VPS26A-209ENST00000497564 SERTM2A0A1B0GWG4 89 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 ZNF727A8MUV8 499 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 TCRAP04437 139 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 CEBPGP53567 150 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 CMTM2Q8TAZ6 248 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 SMIM7Q9BQ49 75 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 KLF12Q9Y4X4 402 aa10.69□□□□□ -0.7
VPS26A-209ENST00000497564 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 C9JCJ5 164 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 G3V4G9 280 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 ISLRO14498 428 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 APOC3P02656 99 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
VPS26A-209ENST00000497564 AKR1C3P42330 323 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 TAS2R60P59551 318 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 SVBPQ8N300 66 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 NIPSNAP3BQ9BS92 247 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 DERL1Q9BUN8 251 aa10.68□□□□□ -0.7
VPS26A-209ENST00000497564 TRAV2A0A0B4J234 112 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 TRBV6-1A0A0K0K1D8 114 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 DIRC3C9JPN6 131 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 M0R3E3 92 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 RPL35P42766 123 aaKnown RBP10.67□□□□□ -0.7
VPS26A-209ENST00000497564 CSN1S1P47710 185 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 CNN1P51911 297 aaKnown RBP10.67□□□□□ -0.7
VPS26A-209ENST00000497564 GNG5P63218 68 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 GUCA2BQ16661 112 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 C16orf92Q96LL3 132 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 NAT8Q9UHE5 227 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 LY96Q9Y6Y9 160 aa10.67□□□□□ -0.7
VPS26A-209ENST00000497564 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 FBLL1A6NHQ2 334 aaKnown RBP10.66□□□□□ -0.7
VPS26A-209ENST00000497564 RPL11P62913 178 aaKnown RBP10.66□□□□□ -0.7
VPS26A-209ENST00000497564 PNRC1Q12796 327 aaPredicted RBP10.66□□□□□ -0.7
VPS26A-209ENST00000497564 PSG3Q16557 428 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 TMEM183BQ1AE95 376 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 ZNF674Q2M3X9 581 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 LINC00482Q8N8I6 264 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 TMEM75Q8N9X5 138 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 TVP23CQ96ET8 276 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 FMC1Q96HJ9 113 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 IGF2BP2-AS1Q96M15 143 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 MS4A6AQ9H2W1 248 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 SDF2L1Q9HCN8 221 aa10.66□□□□□ -0.7
VPS26A-209ENST00000497564 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 K7EQG2 157 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 K7EQM0 130 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 TSPAN4O14817 238 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 SNAPINO95295 136 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 PF4P02776 101 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 ID1P41134 155 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 LCN12Q6JVE5 192 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 DYNLRB2Q8TF09 96 aa10.65□□□□□ -0.7
VPS26A-209ENST00000497564 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 IGLV2-11P01706 119 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 PRB2P02812 416 aaPredicted RBP10.64□□□□□ -0.71
VPS26A-209ENST00000497564 PAFAH1B2P68402 229 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 BEAN1Q3B7T3 259 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 OXLD1Q5BKU9 147 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 CENPWQ5EE01 88 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 SAMD5Q5TGI4 173 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 GOLT1AQ6ZVE7 132 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 RNF182Q8N6D2 247 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 SMIM12Q96EX1 92 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 SORL1Q92673 2214 aa10.64□□□□□ -0.71
VPS26A-209ENST00000497564 GNG4P50150 75 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 UBE2G1P62253 170 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
VPS26A-209ENST00000497564 TMEM61Q8N0U2 210 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 CLRN3Q8NCR9 226 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 OR2K2Q8NGT1 345 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 C20orf173Q96LM9 149 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 LINC00479Q96M42 142 aa10.63□□□□□ -0.71
VPS26A-209ENST00000497564 IGKV3-7A0A075B6H7 116 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 ZNF705FA8MVS1 300 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 B4DEV8 164 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 DNASE2O00115 360 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 LTAP01374 205 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 FLI1Q01543 452 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 RHEBQ15382 184 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 CD300EQ496F6 205 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 RBPMS2Q6ZRY4 209 aaKnown RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 Q86TA4 180 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 LINC01551Q86U37 167 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 GBGT1Q8N5D6 347 aa10.62□□□□□ -0.71
VPS26A-209ENST00000497564 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
VPS26A-209ENST00000497564 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms