RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 TIMM23O14925 209 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 HSBP1O75506 76 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 HLA-DQA1P01909 254 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 ZFP36P26651 326 aaKnown RBP9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 CNTFRP26992 372 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 MFAP4P55083 255 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 LMO4P61968 165 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 TTC9CQ8N5M4 171 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 OR2T6Q8NHC8 308 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 IGF2BP2-AS1Q96M15 143 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 DUX5Q96PT3 197 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 KALRNO60229 2985 aa9.15□□□□□ -0.95
SNRNP200-208ENST00000497539 TCRBV4S1A1TA0A5B7 111 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 SMIM9A6NGZ8 99 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 VWC2LB2RUY7 222 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 DLX1P56177 255 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 VMO1Q7Z5L0 202 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 PERPQ96FX8 193 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 TRGV9Q99603 122 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 F11RQ9Y624 299 aaKnown RBP9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 ITPR1Q14643 2758 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 IZUMO1RA6ND01 250 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 MOSP00540 346 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 TMEM116Q8NCL8 245 aa9.14□□□□□ -0.95
SNRNP200-208ENST00000497539 NBR2O15453 112 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 UBE2L3P68036 154 aaKnown RBP9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 NUP35Q8NFH5 326 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 JMJD8Q96S16 334 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 PLXNB1O43157 2135 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 FAM181BA6NEQ2 426 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 TAS2R45P59539 299 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 GNG5P63218 68 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 OR1L4Q8NGR5 311 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 SLC25A33Q9BSK2 321 aa9.13□□□□□ -0.95
SNRNP200-208ENST00000497539 ACACBO00763 2458 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 NDUFS7O75251 213 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 SPINK8P0C7L1 97 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 C8orf88P0DMB2 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 FOXA3P55318 350 aaPredicted RBP9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 SRSF12Q8WXF0 261 aaKnown RBP9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 TNFRSF19Q9NS68 423 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 MALRD1Q5VYJ5 2156 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 NAV3Q8IVL0 2385 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 A6NDN8 102 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE12JA6NER3 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE7O76087 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 IGHV4-39P01824 125 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE12FP0CL80 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE12GP0CL81 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE12IP0CL82 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 UBE2E1P51965 193 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 GAGE4Q13068 117 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 KLRD1Q13241 179 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 SLC25A2Q9BXI2 301 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 FBXL15Q9H469 300 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 SPANXB1Q9NS25 103 aaPredicted RBP9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 HIVEP3Q5T1R4 2406 aa9.12□□□□□ -0.95
SNRNP200-208ENST00000497539 ATRXP46100 2492 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 NPIPB5A8MRT5 1133 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 FABP5P3A8MUU1 101 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 PRB4P10163 310 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 KLK9Q2XQG4 91 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 AJUBAQ96IF1 538 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 FAM167A-AS1Q96KT0 104 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 KLK9Q9UKQ9 250 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 SPTA1P02549 2419 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 A0A1W2PRE2 83 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 HIGD1CA8MV81 97 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 NHLRC4P0CG21 123 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 OR10AG1Q8NH19 301 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 TMEM190Q8WZ59 177 aa9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 SPAG8Q99932 426 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 HRNRQ86YZ3 2850 aaPredicted RBP9.11□□□□□ -0.95
SNRNP200-208ENST00000497539 H3BTX0 84 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 PRB3Q04118 309 aaPredicted RBP9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 NPIPB3Q92617 1050 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 MRPL36Q9P0J6 103 aaKnown RBP9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 hDV102S1A0JD36 115 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 C2orf70A6NJV1 201 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 I3L2K1 104 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 UBE2G1P62253 170 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 BPESC1Q9GZL8 116 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 TACC2O95359 2948 aa9.1□□□□□ -0.95
SNRNP200-208ENST00000497539 FAM162BQ5T6X4 162 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 URB1-AS1Q96HZ7 61 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 CENPVL3A0A0U1RRI6 287 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 ZNF138P52744 262 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 DYNAPQ8N1N2 210 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 TMEM160Q9NX00 188 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 SPCS1Q9Y6A9 102 aa9.09□□□□□ -0.95
SNRNP200-208ENST00000497539 PKD1L2Q7Z442 2459 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 PATE2Q6UY27 113 aa9.08□□□□□ -0.96
SNRNP200-208ENST00000497539 C10orf105Q8TEF2 133 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms