RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 Q8WTZ3 238 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 GNPNAT1Q96EK6 184 aaPredicted RBP1.43□□□□□ -2.18
CBX3-208ENST00000497498 WDR34Q96EX3 536 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 ABHD14BQ96IU4 210 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 TEX37Q96LM6 180 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 MCEEQ96PE7 176 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 SDF2Q99470 211 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 TBX5Q99593 518 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 TMEM70Q9BUB7 260 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 DERL1Q9BUN8 251 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 SNRNP25Q9BV90 132 aaKnown RBP1.43□□□□□ -2.18
CBX3-208ENST00000497498 TSSK6Q9BXA6 273 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 ST20Q9HBF5 79 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 RDH14Q9HBH5 336 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 PRSS16Q9NQE7 514 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 GPR84Q9NQS5 396 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 TMEM106BQ9NUM4 274 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 ERG28Q9UKR5 140 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 FUT9Q9Y231 359 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 SIGLEC9Q9Y336 463 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 DIDO1Q9BTC0 2240 aaKnown RBP1.43□□□□□ -2.18
CBX3-208ENST00000497498 ZFC3H1O60293 1989 aaKnown RBP1.43□□□□□ -2.18
CBX3-208ENST00000497498 MCM3APO60318 1980 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 THADAQ6YHU6 1953 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 COL4A2P08572 1712 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 FOCADQ5VW36 1801 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 RNF213Q63HN8 5207 aa1.43□□□□□ -2.18
CBX3-208ENST00000497498 FCGBPQ9Y6R7 5405 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 LYSTQ99698 3801 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 FAT4Q6V0I7 4981 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PDCD11Q14690 1871 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 ROS1P08922 2347 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TRAV14DV4A0A0A6YYC5 116 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 IGHV7-4-1A0A0J9YVY3 117 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CENPVL3A0A0U1RRI6 287 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 A0A1B0GV50 99 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 A0A1B0GX51 115 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 DUXBA0A1W2PPF3 345 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 IGLC7A0M8Q6 106 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 RBFOX3A6NFN3 312 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 OR51F1A6NGY5 319 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 F8W1H4 67 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 H3BQ15 152 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 H7C1C5 153 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 J3KT08 172 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PIRO00625 290 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ENSAO43768 121 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 GNG7O60262 68 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ALOX12BO75342 701 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TRAPPC6AO75865 159 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CNIH1O95406 144 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CYB5AP00167 134 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 HRASP01112 189 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ORM1P02763 201 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PRH1P02810 166 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TRGC2P03986 189 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 MAS1P04201 325 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ATP5G1P05496 136 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TACSTD2P09758 323 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 IGLC1P0CG04 106 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 IGLC2P0DOY2 106 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 IGLC3P0DOY3 106 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 HIST1H1EP10412 219 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 ALOX5APP20292 161 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 GZMHP20718 246 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PSMB5P28074 263 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TSPOP30536 169 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 GRPRP30550 384 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PRSS3P35030 304 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ATP5G3P48201 142 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 DLX6P56179 175 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 MTPNP58546 118 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 RHOBP62745 196 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 RPS28P62857 69 aaKnown RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 DYNLT1P63172 113 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ATP5G2Q06055 141 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 PLCXD2Q0VAA5 305 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 LRRC75BQ2VPJ9 315 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 SLC25A35Q3KQZ1 300 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 SPATA45Q537H7 98 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 OR10J3Q5JRS4 329 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CLEC12AQ5QGZ9 265 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CPTPQ5TA50 214 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 STUMQ69YW2 141 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 MORN3Q6PF18 240 aaPredicted RBP1.42□□□□□ -2.18
CBX3-208ENST00000497498 Q6Q795 121 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 FOXI2Q6ZQN5 318 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 S100A7AQ86SG5 101 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 GKN2Q86XP6 184 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 BOD1L2Q8IYS8 172 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ZNF101Q8IZC7 436 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 OR8I2Q8N0Y5 310 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 CA13Q8N1Q1 262 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 SYS1Q8N2H4 156 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 MUC15Q8N387 334 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TTC9CQ8N5M4 171 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 DRAM1Q8N682 238 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 C5orf17Q8NAS9 161 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 TMEM229BQ8NBD8 167 aa1.42□□□□□ -2.18
CBX3-208ENST00000497498 ST6GALNAC3Q8NDV1 305 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms