RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 FGL1Q08830 312 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 SPINK13Q1W4C9 94 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 ZNF738Q8NE65 137 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 FAM210BQ96KR6 192 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 C20orf144Q9BQM9 153 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 HSPB11Q9Y547 144 aa7.75□□□□□ -1.17
SHROOM3-210ENST00000497440 NPIPB6E9PJ23 425 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 LY6G6CO95867 125 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 HBE1P02100 147 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 CDKN1BP46527 198 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 RRN3P1Q2M238 152 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 LRRC37A5PQ49AS3 106 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 TMEM256Q8N2U0 113 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 ZNF503Q96F45 646 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 SLC25A2Q9BXI2 301 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 ALG5Q9Y673 324 aa7.74□□□□□ -1.17
SHROOM3-210ENST00000497440 IGHV4-4A0A075B6R2 117 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 DEFB131BA0A096LNP1 70 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 LOC102723971A0A1B0GUV8 181 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 SSNA1O43805 119 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 INSP01308 110 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 PRM2P04554 102 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 SNRPCP09234 159 aaKnown RBP7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 CT45A10P0DMU9 189 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 AZU1P20160 251 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 RPL12P30050 165 aaKnown RBP7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 TAS2R60P59551 318 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 HIST1H1AQ02539 215 aaPredicted RBP7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 KIR3DS1Q14943 382 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 FAM222AQ5U5X8 452 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 LINC00612Q8N6U2 182 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 THAP6Q8TBB0 222 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 FXYD5Q96DB9 178 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 ATP5SQ99766 215 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 WFDC1Q9HC57 220 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 PRELID1Q9Y255 219 aa7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 YTHDF2Q9Y5A9 579 aaKnown RBP7.73□□□□□ -1.17
SHROOM3-210ENST00000497440 LYRM9A8MSI8 78 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 IGLL5B9A064 214 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 H3BTX0 84 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 M0R3E3 92 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 NMBP08949 121 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 NBEAP1P0C6P0 100 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 PET100P0DJ07 73 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 CLINT1Q14677 625 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 ZNF493Q6ZR52 646 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 C9orf47Q6ZRZ4 202 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 MIR17HGQ75NE6 70 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 RPP25LQ8N5L8 163 aaKnown RBP7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 LRRC20Q8TCA0 184 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 RNASE8Q8TDE3 154 aaKnown RBP7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 NIPSNAP3BQ9BS92 247 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 MRPL32Q9BYC8 188 aaKnown RBP7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 MBD2Q9UBB5 411 aa7.72□□□□□ -1.17
SHROOM3-210ENST00000497440 HERC2O95714 4834 aa7.71□□□□□ -1.17
SHROOM3-210ENST00000497440 TRAV12-2A0A075B6T6 113 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 IGHV3OR16-12A0A075B7B8 117 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 KLLNB2CW77 178 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 H7BYZ3 331 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 ZNF324O75467 553 aaPredicted RBP7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 PYYP10082 97 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 CRISP2P16562 243 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 ZNF767PQ75MW2 155 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 ASB13Q8WXK3 278 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 LINC00477Q96M19 166 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 LINC00467Q9BRT7 94 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 KCNIP2Q9NS61 270 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 PPP1R14DQ9NXH3 145 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 FUT9Q9Y231 359 aa7.71□□□□□ -1.18
SHROOM3-210ENST00000497440 TRBV7-9A0A0J9YWB2 115 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 ZNF705GA8MUZ8 300 aaPredicted RBP7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 RHOBP62745 196 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 FCN2Q15485 313 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 GFI1BQ5VTD9 330 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 LYPD1Q8N2G4 141 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 OR10J6PQ8NGY7 276 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 AQP10Q96PS8 301 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 TIMM9Q9Y5J7 89 aa7.7□□□□□ -1.18
SHROOM3-210ENST00000497440 C17orf112F2Z3M2 114 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 G3V3Q6 166 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 EMP1P54849 157 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 Q5BKY6 102 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 ARL6IP6Q8N6S5 226 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 OR2G3Q8NGZ4 309 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 SUN5Q8TC36 379 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 TMEM263Q8WUH6 116 aaKnown RBP7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 RNF141Q8WVD5 230 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 TMEM208Q9BTX3 173 aa7.69□□□□□ -1.18
SHROOM3-210ENST00000497440 CBY3A6NI87 242 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 SLC25A5P05141 298 aaKnown RBP7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 GIPP09681 153 aaPredicted RBP7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 PRB4P10163 310 aaPredicted RBP7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 EXOC3-AS1Q8N2X6 119 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 ZFAND2AQ8N6M9 145 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 C16orf74Q96GX8 76 aa7.68□□□□□ -1.18
SHROOM3-210ENST00000497440 C18orf15Q96N68 181 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms