RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ATP6V0CP27449 155 aa13.96□□□□□ -0.17
CTDSP1-213ENST00000496785 PQLC2Q6ZP29 291 aa13.96□□□□□ -0.17
CTDSP1-213ENST00000496785 OR10G4Q8NGN3 311 aa13.96□□□□□ -0.17
CTDSP1-213ENST00000496785 OR10G9Q8NGN4 311 aa13.96□□□□□ -0.17
CTDSP1-213ENST00000496785 OR10G7Q8NGN6 311 aa13.96□□□□□ -0.17
CTDSP1-213ENST00000496785 TMEM189A5PLL7 270 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 ZNF705FA8MVS1 300 aaPredicted RBP13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 NDUFB4O95168 129 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 TSPOP30536 169 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 SPINK13Q1W4C9 94 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 LYPD1Q8N2G4 141 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 C11orf45Q8TAV5 145 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 FXYD5Q96DB9 178 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 TMEM208Q9BTX3 173 aa13.95□□□□□ -0.18
CTDSP1-213ENST00000496785 IGHV3OR16-12A0A075B7B8 117 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 CXorf65A6NEN9 183 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 OR10J4P0C629 311 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 RAB2AP61019 212 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 ZNF345Q14585 488 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 RPL7L1Q6DKI1 246 aaKnown RBP13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 FAM122CQ6P4D5 195 aa13.94□□□□□ -0.18
CTDSP1-213ENST00000496785 NUPR2A6NF83 97 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 HMSDA8MTL9 139 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 M0R2Z0 102 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 HBE1P02100 147 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 CDKN1BP46527 198 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 CDC34P49427 236 aaPredicted RBP13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 ODF3Q96PU9 254 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 RFNGQ9Y644 331 aa13.93□□□□□ -0.18
CTDSP1-213ENST00000496785 NPIPB6E9PJ23 425 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 DEFB4AO15263 64 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 CSN1S1P47710 185 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 ICAM4Q14773 271 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 FAM74A1Q5RGS3 127 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 TMEM256Q8N2U0 113 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 EXOC3-AS1Q8N2X6 119 aa13.92□□□□□ -0.18
CTDSP1-213ENST00000496785 PRAC2D3DTV9 90 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 SMLR1H3BR10 107 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 M0R3E3 92 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 RBMY1A1P0DJD3 496 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 RBMY1CP0DJD4 496 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 LEPP41159 167 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 PMS2P11Q13670 270 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 RBMY1FQ15415 496 aaKnown RBP13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 RRN3P1Q2M238 152 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 ZNF503Q96F45 646 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 PHYHIPLQ96FC7 376 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 C20orf144Q9BQM9 153 aa13.91□□□□□ -0.18
CTDSP1-213ENST00000496785 A0A0D9SG52 128 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 TEX48A0A1B0GUV7 120 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 BAP18Q8IXM2 172 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 C1orf158Q8N1D5 194 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 KCNRGQ8N5I3 272 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 LINC00477Q96M19 166 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 ARPC5LQ9BPX5 153 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 ACTR3CQ9C0K3 210 aaPredicted RBP13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 SH3BGRL3Q9H299 93 aa13.9□□□□□ -0.18
CTDSP1-213ENST00000496785 CRXO43186 299 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 RANP62826 216 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 TMEM78Q5T7P6 136 aa13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 Q6ZNX1 250 aa13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 RPP25LQ8N5L8 163 aaKnown RBP13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 RXFP4Q8TDU9 374 aa13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 Q9H3A6 140 aa13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 KLK5Q9Y337 293 aaPredicted RBP13.89□□□□□ -0.19
CTDSP1-213ENST00000496785 TRAV12-2A0A075B6T6 113 aa13.88□□□□□ -0.19
CTDSP1-213ENST00000496785 STAG3L2P0CL84 134 aa13.88□□□□□ -0.19
CTDSP1-213ENST00000496785 STAG3L3P0CL85 134 aa13.88□□□□□ -0.19
CTDSP1-213ENST00000496785 AKR1C8PQ5T2L2 129 aa13.88□□□□□ -0.19
CTDSP1-213ENST00000496785 RAB24Q969Q5 203 aa13.88□□□□□ -0.19
CTDSP1-213ENST00000496785 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 KANTRA0A1W2PQU2 76 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 C11orf94C9JXX5 98 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 EIF5AP63241 154 aaKnown RBP13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 CEMP1Q6PRD7 247 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 ARL6IP6Q8N6S5 226 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 CMTM2Q8TAZ6 248 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 PHLDA1Q8WV24 401 aaPredicted RBP13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 OTORQ9NRC9 128 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 DNAH7Q8WXX0 4024 aa13.87□□□□□ -0.19
CTDSP1-213ENST00000496785 RBAKDNA6NC62 111 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 CXorf1O96002 111 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 SLC25A5P05141 298 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 SPART-AS1P0CW21 52 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 ARL14EPLP0DKL9 152 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 PRB4P10163 310 aaPredicted RBP13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 NANOS2P60321 138 aaKnown RBP13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 C9orf47Q6ZRZ4 202 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 LINC01587Q99440 93 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 TMEM167BQ9NRX6 74 aa13.86□□□□□ -0.19
CTDSP1-213ENST00000496785 H7BYZ3 331 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 HMGB3O15347 200 aaKnown RBP13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 NMBP08949 121 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 CT45A10P0DMU9 189 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 TAS2R60P59551 318 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 TCTE3Q8IZS6 198 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 OR11H4Q8NGC9 324 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 CYTL1Q9NRR1 136 aa13.85□□□□□ -0.19
CTDSP1-213ENST00000496785 TRBV7-9A0A0J9YWB2 115 aa13.84□□□□□ -0.19
CTDSP1-213ENST00000496785 CTXND1A0A1B0GTU2 59 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms