RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 SONP18583 2426 aaKnown RBP4.91□□□□□ -1.62
SSBP1-213ENST00000496622 TRBV20-1A0A075B6N2 111 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 IGHV3-48P01763 117 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 P0C879 139 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 VDAC2P45880 294 aaPredicted RBP4.91□□□□□ -1.62
SSBP1-213ENST00000496622 KRTDAPP60985 99 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 CCL20P78556 96 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 C10orf55Q5SWW7 151 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 SPSB3Q6PJ21 355 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 SLC25A48Q6ZT89 311 aaKnown RBP4.91□□□□□ -1.62
SSBP1-213ENST00000496622 Q6ZUT4 128 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 TEX29Q8N6K0 151 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 ZNF525Q8N782 197 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 C3orf56Q8N813 242 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 MBD6Q96DN6 1003 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 OR4C12Q96R67 309 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 HCFC1P51610 2035 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 APCP25054 2843 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 UBE2L5PA0A1B0GUS4 154 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 FNDC10F2Z333 226 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 RRHO14718 337 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 CSN3P07498 182 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 MALP21145 153 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 XGP55808 180 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 KLRD1Q13241 179 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 MOB3BQ86TA1 216 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 FAM213BQ8TBF2 198 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 ADTRPQ96IZ2 230 aa4.91□□□□□ -1.62
SSBP1-213ENST00000496622 SPANXB1Q9NS25 103 aaPredicted RBP4.91□□□□□ -1.62
SSBP1-213ENST00000496622 BEX4Q9NWD9 120 aaPredicted RBP4.91□□□□□ -1.62
SSBP1-213ENST00000496622 ITPR2Q14571 2701 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 IGHV1-8P0DP01 117 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 EVI2AP22794 236 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 ZFP36P26651 326 aaKnown RBP4.9□□□□□ -1.62
SSBP1-213ENST00000496622 CNTFRP26992 372 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 NDUFV3P56181 108 aaKnown RBP4.9□□□□□ -1.62
SSBP1-213ENST00000496622 LGALS4P56470 323 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 RPL11P62913 178 aaKnown RBP4.9□□□□□ -1.62
SSBP1-213ENST00000496622 VWC2Q2TAL6 325 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 Q6AWC8 147 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 C11orf71Q6IPW1 123 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 OR5AU1Q8NGC0 362 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 MBD3L1Q8WWY6 194 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 NIPSNAP3BQ9BS92 247 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 TMEM242Q9NWH2 141 aa4.9□□□□□ -1.62
SSBP1-213ENST00000496622 FOXA2Q9Y261 457 aaPredicted RBP4.9□□□□□ -1.62
SSBP1-213ENST00000496622 SOX21Q9Y651 276 aaPredicted RBP4.9□□□□□ -1.62
SSBP1-213ENST00000496622 MXRA5Q9NR99 2828 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 DUXBA0A1W2PPF3 345 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 PAGE4O60829 102 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 GATA2P23769 480 aaPredicted RBP4.9□□□□□ -1.63
SSBP1-213ENST00000496622 DLX6P56179 175 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
SSBP1-213ENST00000496622 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 IL17RELQ6ZVW7 336 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 TMEM86BQ8N661 226 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 RARRES2Q99969 163 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 C20orf78Q9BR46 151 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
SSBP1-213ENST00000496622 BORCS7-ASMTA0A0B4J1R7 106 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 PRSS29PA6NIE9 313 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 H0YJW9 148 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 H3BUT2 72 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 FAM106CPP0CH98 169 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 SAA1P0DJI8 122 aaPredicted RBP4.89□□□□□ -1.63
SSBP1-213ENST00000496622 FAM3BP58499 235 aaPredicted RBP4.89□□□□□ -1.63
SSBP1-213ENST00000496622 FAM106AQ4KMX7 169 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 LINC00336Q6ZUF6 198 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 SSX8Q7RTT4 187 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 SLC25A33Q9BSK2 321 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 BPESC1Q9GZL8 116 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 ST20Q9HBF5 79 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 KAAG1Q9UBP8 84 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 HILPDAQ9Y5L2 63 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 ACANP16112 2415 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 C9orf118A6NHY6 69 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 CRYGDP07320 174 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 MSMO1Q15800 293 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 OR10AG1Q8NH19 301 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 PYGO2Q9BRQ0 406 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 TMEM133Q9H2Q1 129 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 MS4A6AQ9H2W1 248 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 LINC00574Q9H8X3 128 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 HEYLQ9NQ87 328 aaPredicted RBP4.89□□□□□ -1.63
SSBP1-213ENST00000496622 PRNDQ9UKY0 176 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 TANC2Q9HCD6 1990 aa4.89□□□□□ -1.63
SSBP1-213ENST00000496622 SH2D7A6NKC9 451 aaPredicted RBP4.88□□□□□ -1.63
SSBP1-213ENST00000496622 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 PMS2P5A8MQ11 134 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 HSBP1O75506 76 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 IGKV1D-33P01593 117 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 IGKV1-33P01594 117 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 ORM2P19652 201 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 ERVK-16P61578 105 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 SLC38A11Q08AI6 406 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 TAL2Q16559 108 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 ATOH7Q8N100 152 aa4.88□□□□□ -1.63
SSBP1-213ENST00000496622 Q8N7P7 452 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms