RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 HLA-DMBP28068 263 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 GCSAMLQ5JQS6 135 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 ALKAL2Q6UX46 152 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 Q6ZTC4 211 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 OR2G3Q8NGZ4 309 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 STOML3Q8TAV4 291 aa10.39□□□□□ -0.75
CXCL12-208ENST00000496375 PSMG3Q9BT73 122 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-208ENST00000496375 ZNF471Q9BX82 626 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-208ENST00000496375 A8MTW9 85 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 ZNF253O75346 499 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 NMBP08949 121 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
CXCL12-208ENST00000496375 HLA-DRB4P13762 266 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 GUK1Q16774 197 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 SPATA31B1PQ5VZV4 182 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 CSNK1G2-AS1Q8NCQ2 148 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 FAM167A-AS1Q96KT0 104 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 SAV1Q9H4B6 383 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-208ENST00000496375 HLA-DRB4X5D2U9 266 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
CXCL12-208ENST00000496375 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 H3BMM0 161 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 FAM78BQ5VT40 261 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 FOXI2Q6ZQN5 318 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 SAT2Q96F10 170 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-208ENST00000496375 C16orf92Q96LL3 132 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 C20orf173Q96LM9 149 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 SLC50A1Q9BRV3 221 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 ZNF331Q9NQX6 463 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-208ENST00000496375 FUT9Q9Y231 359 aa10.37□□□□□ -0.75
CXCL12-208ENST00000496375 TRAV5A0A0B4J249 113 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 H3BQ15 152 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 SERF2P84101 59 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 PDE6HQ13956 83 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 EIF5AL1Q6IS14 154 aaKnown RBP10.36□□□□□ -0.75
CXCL12-208ENST00000496375 EIF4E3Q8N5X7 224 aaKnown RBP10.36□□□□□ -0.75
CXCL12-208ENST00000496375 SLC25A2Q9BXI2 301 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 RPRMQ9NS64 109 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 XCL2Q9UBD3 114 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 CELA1Q9UNI1 258 aa10.36□□□□□ -0.75
CXCL12-208ENST00000496375 IGHV4-4A0A075B6R2 117 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 A0A0J9YX75 114 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
CXCL12-208ENST00000496375 M6PRP20645 277 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 ATP6V0CP27449 155 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 NUTF2P61970 127 aaKnown RBP10.35□□□□□ -0.75
CXCL12-208ENST00000496375 RPL7L1Q6DKI1 246 aaKnown RBP10.35□□□□□ -0.75
CXCL12-208ENST00000496375 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 BAP18Q8IXM2 172 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 C1QTNF4Q9BXJ3 329 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 CYTL1Q9NRR1 136 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 ZNF586Q9NXT0 402 aa10.35□□□□□ -0.75
CXCL12-208ENST00000496375 TRBV19A0A075B6N1 114 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 SLC17A3O00476 420 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 RHOBP62745 196 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 ACOT6Q3I5F7 207 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-208ENST00000496375 GDF5OSQ5U4N7 250 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 HSD17B11Q8NBQ5 300 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 GNPNAT1Q96EK6 184 aaPredicted RBP10.34□□□□□ -0.75
CXCL12-208ENST00000496375 LINC00052Q96N35 136 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
CXCL12-208ENST00000496375 DYNC1H1Q14204 4646 aaKnown RBP10.33□□□□□ -0.76
CXCL12-208ENST00000496375 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 PSG3Q16557 428 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 TOR2AQ5JU69 321 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 CCDC28AQ8IWP9 274 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 PCNPQ8WW12 178 aaKnown RBP10.33□□□□□ -0.76
CXCL12-208ENST00000496375 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
CXCL12-208ENST00000496375 ZNF503Q96F45 646 aa10.33□□□□□ -0.76
CXCL12-208ENST00000496375 DEFB131BA0A096LNP1 70 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 NDUFB4O95168 129 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 MBP02144 154 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 PYYP10082 97 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 TAS2R45P59539 299 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 DEFB1P60022 68 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 RAB2AP61019 212 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 FXYD5Q96DB9 178 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 KRTAP17-1Q9BYP8 105 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 SH3BGRL3Q9H299 93 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 OR51M1Q9H341 326 aa10.32□□□□□ -0.76
CXCL12-208ENST00000496375 F6UB75 175 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 IGKV3-20P01619 116 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 AMBPP02760 352 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 EBLN2Q6P2I7 272 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 OR10G9Q8NGN4 311 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 OR10G7Q8NGN6 311 aa10.31□□□□□ -0.76
CXCL12-208ENST00000496375 RAB19A4D1S5 217 aa10.3□□□□□ -0.76
CXCL12-208ENST00000496375 DUSP14O95147 198 aaKnown RBP10.3□□□□□ -0.76
CXCL12-208ENST00000496375 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms