RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 IBA57Q5T440 356 aaKnown RBP12.48□□□□□ -0.41
HLA-A-208ENST00000496081 PRNTQ86SH4 94 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 GRAMD2BQ96HH9 432 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 IMMP2LQ96T52 175 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
HLA-A-208ENST00000496081 CHEK1O14757 476 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 EDN2P20800 178 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 CDX1P47902 265 aaPredicted RBP12.47□□□□□ -0.41
HLA-A-208ENST00000496081 FAM3BP58499 235 aaPredicted RBP12.47□□□□□ -0.41
HLA-A-208ENST00000496081 FLI1Q01543 452 aaPredicted RBP12.47□□□□□ -0.41
HLA-A-208ENST00000496081 C18orf65Q6ZTR6 163 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 C8orf86Q6ZUL3 223 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 RHPN1-AS1Q9BWJ2 59 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 UFC1Q9Y3C8 167 aa12.47□□□□□ -0.41
HLA-A-208ENST00000496081 TRAV8-2A0A0B4J237 113 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 SERTM2A0A1B0GWG4 89 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
HLA-A-208ENST00000496081 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
HLA-A-208ENST00000496081 FOXL1Q12952 345 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 LCN12Q6JVE5 192 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 KCNIP4Q6PIL6 250 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 FAM231DQ6ZW35 169 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 TMEM183AQ8IXX5 376 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 RNF182Q8N6D2 247 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.41
HLA-A-208ENST00000496081 PSG8Q9UQ74 426 aa12.46□□□□□ -0.41
HLA-A-208ENST00000496081 IGKV2-40A0A087WW87 121 aaPredicted RBP12.46□□□□□ -0.42
HLA-A-208ENST00000496081 A0A1W2PPQ1 181 aa12.46□□□□□ -0.42
HLA-A-208ENST00000496081 IGKV2D-40P01614 121 aaPredicted RBP12.46□□□□□ -0.42
HLA-A-208ENST00000496081 PRR27Q6MZM9 219 aa12.46□□□□□ -0.42
HLA-A-208ENST00000496081 C1QL4Q86Z23 238 aa12.46□□□□□ -0.42
HLA-A-208ENST00000496081 IL36BQ9NZH7 164 aa12.46□□□□□ -0.42
HLA-A-208ENST00000496081 MLXQ9UH92 298 aa12.46□□□□□ -0.42
HLA-A-208ENST00000496081 HOXD3P31249 432 aaPredicted RBP12.45□□□□□ -0.42
HLA-A-208ENST00000496081 NUDT10Q8NFP7 164 aa12.45□□□□□ -0.42
HLA-A-208ENST00000496081 NUDT11Q96G61 164 aa12.45□□□□□ -0.42
HLA-A-208ENST00000496081 C16orf95Q9H693 158 aa12.45□□□□□ -0.42
HLA-A-208ENST00000496081 ZFP30Q9Y2G7 519 aa12.45□□□□□ -0.42
HLA-A-208ENST00000496081 TMEM213A2RRL7 107 aa12.44□□□□□ -0.42
HLA-A-208ENST00000496081 LINC00322Q6ZN03 302 aaPredicted RBP12.44□□□□□ -0.42
HLA-A-208ENST00000496081 REC114Q7Z4M0 266 aa12.44□□□□□ -0.42
HLA-A-208ENST00000496081 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
HLA-A-208ENST00000496081 ASCL2Q99929 193 aa12.44□□□□□ -0.42
HLA-A-208ENST00000496081 A8MWP6 167 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 C1orf196B1AJZ1 125 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 INAFM1C9JVW0 142 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 PRAC2D3DTV9 90 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 LGALS9O00182 355 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 SYNJ2BPP57105 145 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 DEFB136Q30KP8 78 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 C4orf3Q8WVX3 66 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 ZNF705GA8MUZ8 300 aaPredicted RBP12.43□□□□□ -0.42
HLA-A-208ENST00000496081 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 HIST2H2BDQ6DRA6 164 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 C16orf92Q96LL3 132 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 VGLL1Q99990 258 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 BIN3Q9NQY0 253 aa12.43□□□□□ -0.42
HLA-A-208ENST00000496081 C19orf71A6NCJ1 209 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 SOCS3O14543 225 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
HLA-A-208ENST00000496081 RPL11P62913 178 aaKnown RBP12.42□□□□□ -0.42
HLA-A-208ENST00000496081 KLF5Q13887 457 aaPredicted RBP12.42□□□□□ -0.42
HLA-A-208ENST00000496081 ZFP82Q8N141 532 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 MRPL53Q96EL3 112 aaKnown RBP12.42□□□□□ -0.42
HLA-A-208ENST00000496081 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 NRN1Q9NPD7 142 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 SELENOKQ9Y6D0 94 aa12.42□□□□□ -0.42
HLA-A-208ENST00000496081 CA1P00915 261 aaPredicted RBP12.41□□□□□ -0.42
HLA-A-208ENST00000496081 OR11H1Q8NG94 326 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 ZC2HC1AQ96GY0 325 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 CLEC5AQ9NY25 188 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 NSD1Q96L73 2696 aaPredicted RBP12.41□□□□□ -0.42
HLA-A-208ENST00000496081 FBLL1A6NHQ2 334 aaKnown RBP12.41□□□□□ -0.42
HLA-A-208ENST00000496081 LINC01619G3V211 115 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 TYMSP04818 313 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 SLURP1P55000 103 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 RAB5BP61020 215 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 KLHL30-AS1Q8NEE0 82 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 SRD5A3Q9H8P0 318 aa12.41□□□□□ -0.42
HLA-A-208ENST00000496081 SMIM27A0A1W2PRY6 76 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 RBAKDNA6NC62 111 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 BMI1P35226 326 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 ERCC8Q13216 396 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 GBGT1Q8N5D6 347 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 WFDC12Q8WWY7 111 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 C20orf173Q96LM9 149 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 PRR25Q96S07 402 aa12.4□□□□□ -0.42
HLA-A-208ENST00000496081 IGKV3-7A0A075B6H7 116 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 TRAV9-1A0A075B6T8 112 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 TRGC2P03986 189 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 CD28P10747 220 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 C11orf44Q8N8P7 122 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 OR1N2Q8NGR9 330 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 Q8TAT8 98 aa12.39□□□□□ -0.43
HLA-A-208ENST00000496081 BTF3L4Q96K17 158 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms