RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 H7BYZ3 331 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 M0R2N4 97 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 FCN2Q15485 313 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 LGALS9BQ3B8N2 356 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 ZNF493Q6ZR52 646 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 C15orf53Q8NAA6 179 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 ENKURQ8TC29 256 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 C20orf144Q9BQM9 153 aa9.01□□□□□ -0.97
PTPRF-214ENST00000496043 TIMM8BQ9Y5J9 83 aaPredicted RBP9.01□□□□□ -0.97
PTPRF-214ENST00000496043 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 UBE2L5PA0A1B0GUS4 154 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 PLAC8L1A1L4L8 177 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 SLC17A3O00476 420 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 MPDU1O75352 247 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 FGF7P21781 194 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 CCDC28AQ8IWP9 274 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 ZNF586Q9NXT0 402 aa9□□□□□ -0.97
PTPRF-214ENST00000496043 FRAS1Q86XX4 4008 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 E5RGE8 158 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 F5H768 121 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 ZNF253O75346 499 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 UPK1BO75841 260 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 SIX6O95475 246 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 ATP5G1P05496 136 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 LEPP41159 167 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 ATP5G3P48201 142 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 CYCSP99999 105 aaKnown RBP8.99□□□□□ -0.97
PTPRF-214ENST00000496043 NHLH2Q02577 135 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 TMEM14CQ9P0S9 112 aa8.99□□□□□ -0.97
PTPRF-214ENST00000496043 TRBV19A0A075B6N1 114 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 INMT-MINDY4F8WBC2 141 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 PRAF2O60831 178 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 CT45A10P0DMU9 189 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 HIST1H1EP10412 219 aaKnown RBP8.98□□□□□ -0.97
PTPRF-214ENST00000496043 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
PTPRF-214ENST00000496043 PARD6GQ9BYG4 376 aaPredicted RBP8.98□□□□□ -0.97
PTPRF-214ENST00000496043 NMES1Q9C002 83 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 NOP10Q9NPE3 64 aaKnown RBP8.98□□□□□ -0.97
PTPRF-214ENST00000496043 PRELID1Q9Y255 219 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 TIMM9Q9Y5J7 89 aa8.98□□□□□ -0.97
PTPRF-214ENST00000496043 IGLV2-18A0A075B6J9 118 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 NPIPB6E9PJ23 425 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 FAM3BP58499 235 aaPredicted RBP8.97□□□□□ -0.97
PTPRF-214ENST00000496043 KIR3DS1Q14943 382 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 GFI1BQ5VTD9 330 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 OR5C1Q8NGR4 320 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 RNASE8Q8TDE3 154 aaKnown RBP8.97□□□□□ -0.97
PTPRF-214ENST00000496043 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
PTPRF-214ENST00000496043 LINC00477Q96M19 166 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 ATG101Q9BSB4 218 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 NPCDR1Q9BY65 106 aa8.97□□□□□ -0.97
PTPRF-214ENST00000496043 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 J3KRW8 73 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 NUDT3O95989 172 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 IFITM3Q01628 133 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 PDE6HQ13956 83 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 Q6ZR54 194 aa8.96□□□□□ -0.98
PTPRF-214ENST00000496043 TRAV12-3A0A0B4J271 114 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 SNURFLB1AK76 121 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 H0YIZ8 118 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 M0R3E3 92 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 RTL8CO15255 209 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 NDUFB4O95168 129 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 SLC25A5P05141 298 aaKnown RBP8.95□□□□□ -0.98
PTPRF-214ENST00000496043 PYYP10082 97 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 ERCC8Q13216 396 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 LRRC37A5PQ49AS3 106 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 GCSAMLQ5JQS6 135 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 SOHLH1Q5JUK2 328 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 THAP6Q8TBB0 222 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 BLNKQ8WV28 456 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 PYGO2Q9BRQ0 406 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 AAMDCQ9H7C9 122 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 OR5AC2Q9NZP5 309 aa8.95□□□□□ -0.98
PTPRF-214ENST00000496043 C17orf112F2Z3M2 114 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 NBEAP1P0C6P0 100 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 DEFA1P59665 94 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 DEFA3P59666 94 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 OR5I1Q13606 314 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 CLINT1Q14677 625 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 MARVELD1Q9BSK0 173 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 SLC25A2Q9BXI2 301 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 WDR61Q9GZS3 305 aaKnown RBP8.94□□□□□ -0.98
PTPRF-214ENST00000496043 AGPAT4-IT1Q9H0P7 198 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 OR51M1Q9H341 326 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 KCNIP2Q9NS61 270 aa8.94□□□□□ -0.98
PTPRF-214ENST00000496043 A0A1B0GVY2 172 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 CCL18P55774 89 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 ICAM4Q14773 271 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 C1orf134Q5TEV5 83 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 MIR17HGQ75NE6 70 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 EXOC3-AS1Q8N2X6 119 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 PPP1R1CQ8WVI7 109 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 FAM167A-AS1Q96KT0 104 aa8.93□□□□□ -0.98
PTPRF-214ENST00000496043 GAGE12BA1L429 117 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 C7orf71A4D174 169 aa8.92□□□□□ -0.98
PTPRF-214ENST00000496043 SSNA1O43805 119 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms