RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 IFT46Q9NQC8 304 aa2.97□□□□□ -1.93
VPS52-222ENST00000495981 TXNL4BQ9NX01 149 aaKnown RBP2.97□□□□□ -1.93
VPS52-222ENST00000495981 MRPL36Q9P0J6 103 aaKnown RBP2.97□□□□□ -1.93
VPS52-222ENST00000495981 IGKV3-7A0A075B6H7 116 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IGHV3OR16-13A0A075B7E8 117 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 A0A0A6YYH2 397 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IGHV3-74A0A0B4J1X5 117 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 TEX50A0A1B0GTY4 177 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 CCDC160A6NGH7 325 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 A6NJ64 397 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IGLL5B9A064 214 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 C11orf94C9JXX5 98 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 PGLYRP1O75594 196 aaPredicted RBP2.96□□□□□ -1.94
VPS52-222ENST00000495981 MT-CO2P00403 227 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IGHV3-48P01763 117 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 MBP02144 154 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 S100A8P05109 93 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 TRAPPC2P0DI81 140 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 TRAPPC2BP0DI82 140 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 MIFP14174 115 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 F2RP25116 425 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 HLA-DMBP28068 263 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 G6PCP35575 357 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 DEFB131AP59861 70 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 RPL32P62910 135 aaKnown RBP2.96□□□□□ -1.94
VPS52-222ENST00000495981 PRCDQ00LT1 54 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 SMCO1Q147U7 214 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 BSXQ3C1V8 233 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 Q56UQ5 140 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 LAMTOR1Q6IAA8 161 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 TOMM20LQ6UXN7 152 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IZUMO2Q6UXV1 221 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 ZNF767PQ75MW2 155 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 TCF24Q7RTU0 167 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 LRRC20Q8TCA0 184 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 DCANP1Q8TF63 244 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 SEC22AQ96IW7 307 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 MRPS26Q9BYN8 205 aaKnown RBP2.96□□□□□ -1.94
VPS52-222ENST00000495981 CCDC90BQ9GZT6 254 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 MS4A6AQ9H2W1 248 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 RNF167Q9H6Y7 350 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 MDFICQ9P1T7 246 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 PRNDQ9UKY0 176 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 OR51B2Q9Y5P1 312 aa2.96□□□□□ -1.94
VPS52-222ENST00000495981 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 TRAV10A0A0B4J240 114 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 IGHV3-66A0A0C4DH42 116 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 LINC00862A6NCI5 91 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 MEIS3P1A6NDR6 274 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 KNCNA6PVL3 124 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 INS-IGF2F8WCM5 200 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 SIVA1O15304 175 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 CYB5BO43169 146 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 MRPS14O60783 128 aaKnown RBP2.95□□□□□ -1.94
VPS52-222ENST00000495981 KRASP01116 189 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 IGKV1-17P01599 117 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 IGKV1-5P01602 117 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 APOA1P02647 267 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 ZNF688P0C7X2 276 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 LINC00614P0C842 121 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 PSMB9P28065 219 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 SDC2P34741 201 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 CXCL6P80162 114 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 C12orf74Q32Q52 190 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 ZC2HC1BQ5TFG8 222 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 MORN3Q6PF18 240 aaPredicted RBP2.95□□□□□ -1.94
VPS52-222ENST00000495981 C6orf223Q8N319 242 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 RNASE11Q8TAA1 199 aaKnown RBP2.95□□□□□ -1.94
VPS52-222ENST00000495981 SLC25A46Q96AG3 418 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 MRGPRFQ96AM1 343 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 PGLYRP4Q96LB8 373 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 CNBD2Q96M20 576 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 C2orf88Q9BSF0 95 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 ZNF2Q9BSG1 426 aaPredicted RBP2.95□□□□□ -1.94
VPS52-222ENST00000495981 HINT2Q9BX68 163 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 CLEC5AQ9NY25 188 aa2.95□□□□□ -1.94
VPS52-222ENST00000495981 TRAV14DV4A0A0A6YYC5 116 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 ZNF705FA8MVS1 300 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 GPR31O00270 319 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 GNG7O60262 68 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 YIF1AO95070 293 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 DUSP14O95147 198 aaKnown RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 ZNF705DP0CH99 300 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 ZNF705BP0CI00 300 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 RNASE2P10153 161 aaKnown RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 CRYBB3P26998 211 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 HRH1P35367 487 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 TGFBR1P36897 503 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 GPX4P36969 197 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 LPAR6P43657 344 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 TAS2R46P59540 309 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 TAS2R20P59543 309 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 MXD1Q05195 221 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 USF2Q15853 346 aaPredicted RBP2.94□□□□□ -1.94
VPS52-222ENST00000495981 PRR4Q16378 134 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 LGALS9BQ3B8N2 356 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 SPINK9Q5DT21 86 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 UBE2NLQ5JXB2 153 aa2.94□□□□□ -1.94
VPS52-222ENST00000495981 DNLZQ5SXM8 178 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms