RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, human

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM53-209	ENST00000495630	TOMM5	Q8N4H5	51 aa		12	□□□□□ -0.49
TMEM53-209	ENST00000495630	OR10P1	Q8NGE3	313 aa		12	□□□□□ -0.49
TMEM53-209	ENST00000495630	DEDD2	Q8WXF8	326 aa		12	□□□□□ -0.49
TMEM53-209	ENST00000495630	PXMP4	Q9Y6I8	212 aa		12	□□□□□ -0.49
TMEM53-209	ENST00000495630	SNRPC	P09234	159 aa	Known RBP	11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630	TMEM14EP	Q6UXP3	125 aa		11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630	ZNF546	Q86UE3	836 aa		11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630	RAB2B	Q8WUD1	216 aa		11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630	SAT2	Q96F10	170 aa	Predicted RBP	11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630	MGAT4C	Q9UBM8	478 aa		11.99	□□□□□ -0.49
TMEM53-209	ENST00000495630		J3KRW8	73 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	ZNF324	O75467	553 aa	Predicted RBP	11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	CCNK	O75909	580 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	NXPH4	O95158	308 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	METTL15P1	P0C7V9	234 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	UBE2M	P61081	183 aa	Known RBP	11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	SLC38A11	Q08AI6	406 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	ZNF680	Q8NEM1	530 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	MCFD2	Q8NI22	146 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	TRIM63	Q969Q1	353 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	BCL7B	Q9BQE9	202 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	MRPS26	Q9BYN8	205 aa	Known RBP	11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	SLIRP	Q9GZT3	109 aa	Known RBP	11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	GSN-AS1	Q9NRJ2	163 aa		11.98	□□□□□ -0.49
TMEM53-209	ENST00000495630	TRAV9-2	A0A087WT02	112 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	LINC00854	A0A1B0GVQ3	168 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	NPIPB6	E9PJ23	425 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	SLC17A3	O00476	420 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	AGPAT2	O15120	278 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	PAX4	O43316	350 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	SSSCA1	O60232	199 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	SLC25A5	P05141	298 aa	Known RBP	11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	IGLC2	P0DOY2	106 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	TMBIM6	P55061	237 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	KRTAP10-1	P60331	282 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	GUK1	Q16774	197 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	TMEM37	Q8WXS4	190 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	LINC00467	Q9BRT7	94 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	GGACT	Q9BVM4	153 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	FUT9	Q9Y231	359 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	TNFRSF18	Q9Y5U5	241 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630	ICOS	Q9Y6W8	199 aa		11.97	□□□□□ -0.49
TMEM53-209	ENST00000495630		A0A087WTM6	91 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	C9orf170	A2RU37	121 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630		H3BQ15	152 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630		H3BTX0	84 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	COX7A2P2	O60397	106 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	TAS2R30	P59541	319 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	PYDC2	Q56P42	97 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	C11orf72	Q8NBR9	251 aa		11.96	□□□□□ -0.49
TMEM53-209	ENST00000495630	TRGV1	A0A0A0MS02	117 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	SLA	Q13239	276 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	ICAM4	Q14773	271 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	OPCML	Q14982	345 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	ANXA2R	Q3ZCQ2	193 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	C10orf113	Q5VZT2	155 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	LYPD5	Q6UWN5	251 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	DNAJC4	Q9NNZ3	241 aa		11.95	□□□□□ -0.5
TMEM53-209	ENST00000495630	FAT1	Q14517	4588 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	C7orf71	A4D174	169 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630		K7EP13	123 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	SPINK4	O60575	86 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	TSC22D2	O75157	780 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	MORN5	Q5VZ52	161 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	PRO0255	Q9UI72	69 aa		11.94	□□□□□ -0.5
TMEM53-209	ENST00000495630	FAM229A	H3BQW9	127 aa		11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	MRPL23	Q16540	153 aa	Known RBP	11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	EIF4E3	Q8N5X7	224 aa	Known RBP	11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	MRPL53	Q96EL3	112 aa	Known RBP	11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	ST6GAL2	Q96JF0	529 aa		11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	LINC00477	Q96M19	166 aa		11.93	□□□□□ -0.5
TMEM53-209	ENST00000495630	KLLN	B2CW77	178 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	ZNF253	O75346	499 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	SMR3B	P02814	79 aa	Predicted RBP	11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	DNAH10OS	P0CZ25	163 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	GCSH	P23434	173 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	TCL1A	P56279	114 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	ARL16	Q0P5N6	197 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630		Q6ZRG5	221 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	MGST2	Q99735	147 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	HHLA3	Q9XRX5	114 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	KLF12	Q9Y4X4	402 aa		11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	FLG2	Q5D862	2391 aa	Predicted RBP	11.92	□□□□□ -0.5
TMEM53-209	ENST00000495630	OR4E1	P0C645	316 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	CRYBA4	P53673	196 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	RAB31	Q13636	194 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	IBA57	Q5T440	356 aa	Known RBP	11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	NEGR1	Q7Z3B1	354 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	FAM19A4	Q96LR4	140 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	MSRB1	Q9NZV6	116 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	MDFIC	Q9P1T7	246 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	LY96	Q9Y6Y9	160 aa		11.91	□□□□□ -0.5
TMEM53-209	ENST00000495630	SRRM2	Q9UQ35	2752 aa	Known RBP	11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	TRAV5	A0A0B4J249	113 aa		11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	PRAF2	O60831	178 aa		11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	MPDU1	O75352	247 aa		11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	RNASE4	P34096	147 aa	Known RBP	11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	CD300C	Q08708	224 aa		11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	ERCC8	Q13216	396 aa		11.9	□□□□□ -0.5
TMEM53-209	ENST00000495630	IAH1	Q2TAA2	248 aa	Predicted RBP	11.9	□□□□□ -0.5

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