RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 ETFRF1Q6IPR1 90 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 DHRSXQ8N5I4 330 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 SLC25A29Q8N8R3 303 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 TP53RKQ96S44 253 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 TMEM222Q9H0R3 208 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 PSORS1C2Q9UIG4 136 aa5.38□□□□□ -1.55
GARNL3-219ENST00000495172 IGHV3-73A0A0B4J1V6 119 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 CEBPZOSA8MTT3 80 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 CASQ2O14958 399 aaPredicted RBP5.37□□□□□ -1.55
GARNL3-219ENST00000495172 SLPIP03973 132 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 FCGR1AP12314 374 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 LEPP41159 167 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 LINC00310P59036 64 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 SPCS3P61009 180 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 TSPAN5P62079 268 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 ARL6IP1Q15041 203 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 DHRS11Q6UWP2 260 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 OR4D5Q8NGN0 318 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 PYDC1Q8WXC3 89 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 GTSF1LQ9H1H1 148 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 Q9UF83 564 aa5.37□□□□□ -1.55
GARNL3-219ENST00000495172 LSM2Q9Y333 95 aaKnown RBP5.37□□□□□ -1.55
GARNL3-219ENST00000495172 IGKV2-24A0A0C4DH68 120 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 H3BRN7 92 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 GYG2O15488 501 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 PFN1P07737 140 aaKnown RBP5.36□□□□□ -1.55
GARNL3-219ENST00000495172 MAJINQ3KP22 176 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 NMSQ5H8A3 153 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 MUC21Q5SSG8 566 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 LCE1DQ5T752 114 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 SH2D6Q7Z4S9 175 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 OR4C5Q8NGB2 326 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 RNF185Q96GF1 192 aa5.36□□□□□ -1.55
GARNL3-219ENST00000495172 PMS2P5A8MQ11 134 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 MPDU1O75352 247 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 ARL6IP5O75915 188 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 HLA-DMAP28067 261 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 NIT1Q86X76 327 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 ZNF664Q8N3J9 261 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 BORCS5Q969J3 196 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 TMEM147Q9BVK8 224 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 CCDC90BQ9GZT6 254 aa5.35□□□□□ -1.55
GARNL3-219ENST00000495172 ZNF331Q9NQX6 463 aaPredicted RBP5.35□□□□□ -1.55
GARNL3-219ENST00000495172 IGHV1OR15-1A0A075B7D0 117 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 TRAV4A0A0B4J268 109 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 MRPS12O15235 138 aaKnown RBP5.34□□□□□ -1.55
GARNL3-219ENST00000495172 SLC25A5P05141 298 aaKnown RBP5.34□□□□□ -1.55
GARNL3-219ENST00000495172 OR10J4P0C629 311 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 RPL19P84098 196 aaKnown RBP5.34□□□□□ -1.55
GARNL3-219ENST00000495172 OPCMLQ14982 345 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 STEAP1BQ6NZ63 245 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 ATRAIDQ6UW56 229 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 ENHOQ6UWT2 76 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 STPG4Q8N801 248 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 OR4D10Q8NGI6 311 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 C2orf50Q96LR7 162 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 LINC00479Q96M42 142 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 GPR82Q96P67 336 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 TRGV9Q99603 122 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 ARPC5LQ9BPX5 153 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 SHANK2-AS3Q9BTD1 123 aa5.34□□□□□ -1.55
GARNL3-219ENST00000495172 IGHV3-64A0A075B6Q5 118 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 A0A087X0K7 114 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 KLLNB2CW77 178 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 MT1HP80294 61 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 SPHARQ15513 63 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 ACOT7LQ6ZUV0 252 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 FAM219AQ8IW50 185 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 TMEM75Q8N9X5 138 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 INO80EQ8NBZ0 244 aaPredicted RBP5.33□□□□□ -1.56
GARNL3-219ENST00000495172 OR5H6Q8NGV6 325 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 RNASE11Q8TAA1 199 aaKnown RBP5.33□□□□□ -1.56
GARNL3-219ENST00000495172 Q8TAT8 98 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 RASL10AQ92737 203 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 UFD1Q92890 307 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 RETNLBQ9BQ08 111 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 C1orf43Q9BWL3 253 aa5.33□□□□□ -1.56
GARNL3-219ENST00000495172 GAGE12JA6NER3 117 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GABARAPH6UMI1 98 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GABARAPO95166 117 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 OR4E1P0C645 316 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
GARNL3-219ENST00000495172 POLR2GP62487 172 aaKnown RBP eCLIP5.32□□□□□ -1.56
GARNL3-219ENST00000495172 COX6A2Q02221 97 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GAGE1Q13065 139 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GAGE4Q13068 117 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GAGE5Q13069 117 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 GAGE13Q4V321 117 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 C1orf146Q5VVC0 180 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 OR5H2Q8NGV7 314 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 LHFPL5Q8TAF8 219 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 SLC25A38Q96DW6 304 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 MND1Q9BWT6 205 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 CDIP1Q9H305 208 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 AUNIPQ9H7T9 357 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 SDF2L1Q9HCN8 221 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 SSR3Q9UNL2 185 aa5.32□□□□□ -1.56
GARNL3-219ENST00000495172 URGCP-MRPS24S4R325 110 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms