RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 KRTAP10-2P60368 255 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 OPCMLQ14982 345 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 BAK1Q16611 211 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 ESRGQ1W209 222 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 C4orf46Q504U0 113 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 S100A7AQ86SG5 101 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 ZNF546Q86UE3 836 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 CCDC28AQ8IWP9 274 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 ZBTB8BQ8NAP8 495 aaPredicted RBP8.76□□□□□ -1.01
SKA1-205ENST00000494518 RXFP4Q8TDU9 374 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 TMEM37Q8WXS4 190 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 MGST2Q99735 147 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 SLC50A1Q9BRV3 221 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 SRRQ9GZT4 340 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 TMPRSS5Q9H3S3 457 aa8.76□□□□□ -1.01
SKA1-205ENST00000494518 TRAV5A0A0B4J249 113 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 H3BQ15 152 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 K7EPK0 472 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 CCSO14618 274 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 RLN2P04090 185 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 CXCL2P19875 107 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 TRIQKQ629K1 86 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 DEDD2Q8WXF8 326 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 SCRT2Q9NQ03 307 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
SKA1-205ENST00000494518 FNDC10F2Z333 226 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 TSC22D2O75157 780 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 TTC32Q5I0X7 151 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 SPANXN2Q5MJ10 180 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 C10orf113Q5VZT2 155 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 Q6ZTI0 123 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 Q9H3A6 140 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 HERC1Q15751 4861 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 FAT1Q14517 4588 aa8.74□□□□□ -1.01
SKA1-205ENST00000494518 C7orf66A4D0T2 115 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 MBPP02686 304 aaPredicted RBP8.73□□□□□ -1.01
SKA1-205ENST00000494518 IGLC2P0DOY2 106 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 BTCP35070 178 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
SKA1-205ENST00000494518 PXDC1Q5TGL8 231 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 MIC13Q5XKP0 118 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 Q8N1X5 172 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 C20orf144Q9BQM9 153 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 RNF24Q9Y225 148 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 LSM5Q9Y4Y9 91 aaKnown RBP8.73□□□□□ -1.01
SKA1-205ENST00000494518 PXMP4Q9Y6I8 212 aa8.73□□□□□ -1.01
SKA1-205ENST00000494518 NAP1L6A6NFF2 107 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 FAM25EA8MYX2 175 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 L7N2F9 121 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 CST7O76096 145 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 LEPP41159 167 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 CAMLGP49069 296 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 BCAP31P51572 246 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 VAMP2P63027 116 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 ERCC8Q13216 396 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 NRARPQ7Z6K4 114 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 ZNF431Q8TF32 576 aaPredicted RBP8.72□□□□□ -1.01
SKA1-205ENST00000494518 SAT2Q96F10 170 aaPredicted RBP8.72□□□□□ -1.01
SKA1-205ENST00000494518 GSN-AS1Q9NRJ2 163 aa8.72□□□□□ -1.01
SKA1-205ENST00000494518 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
SKA1-205ENST00000494518 A0A096LPF7 62 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 M0R3E3 92 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 LINC00315P59091 139 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 TAS2R30P59541 319 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 ZNF503Q96F45 646 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 SDHCQ99643 169 aaPredicted RBP8.71□□□□□ -1.02
SKA1-205ENST00000494518 UPK3BQ9BT76 320 aa8.71□□□□□ -1.02
SKA1-205ENST00000494518 TRGV2A0A075B6R0 118 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 TRGV1A0A0A0MS02 117 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 UBE2L5PA0A1B0GUS4 154 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 FAM24AA6NFZ4 105 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
SKA1-205ENST00000494518 CAV2P51636 162 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 BTN1A1Q13410 526 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 MITD1Q8WV92 249 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 PYGO2Q9BRQ0 406 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 GGACTQ9BVM4 153 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 DNAJC4Q9NNZ3 241 aa8.7□□□□□ -1.02
SKA1-205ENST00000494518 C7orf71A4D174 169 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 IGHV3-53P01767 116 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 CD300CQ08708 224 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 ZNF846Q147U1 533 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 Q6ZRG5 221 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 C11orf72Q8NBR9 251 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 ODF3Q96PU9 254 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 KRTAP9-2Q9BYQ4 174 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 RBM38Q9H0Z9 239 aaKnown RBP8.69□□□□□ -1.02
SKA1-205ENST00000494518 KLF12Q9Y4X4 402 aa8.69□□□□□ -1.02
SKA1-205ENST00000494518 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
SKA1-205ENST00000494518 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
SKA1-205ENST00000494518 C5orf51A6NDU8 294 aa8.68□□□□□ -1.02
SKA1-205ENST00000494518 CENPXA8MT69 81 aa8.68□□□□□ -1.02
SKA1-205ENST00000494518 H3BNG1 76 aa8.68□□□□□ -1.02
SKA1-205ENST00000494518 PYYP10082 97 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms