RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 DYNC1H1Q14204 4646 aaKnown RBP3.58□□□□□ -1.84
PTCD3-219ENST00000494323 NBDYA0A0U1RRE5 68 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 F5H768 121 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 HPGDSO60760 199 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 GAS8-AS1O95177 125 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 HBE1P02100 147 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 CD3DP04234 171 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 SLC25A4P12235 298 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 RORCP51449 518 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 RND3P61587 244 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 PSG9Q00887 426 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 ZNF90Q03938 601 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 OXA1LQ15070 435 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 RRN3P1Q2M238 152 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 SCGB2B2Q4G0G5 96 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 C2orf83Q53S99 150 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 FOXI2Q6ZQN5 318 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 SPATA12Q7Z6I5 190 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 SELENOHQ8IZQ5 122 aaKnown RBP3.58□□□□□ -1.84
PTCD3-219ENST00000494323 C6orf223Q8N319 242 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 TERB2Q8NHR7 220 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 LHFPL5Q8TAF8 219 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 MARCH1Q8TCQ1 289 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 GLYATL2Q8WU03 294 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 GPR146Q96CH1 333 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 TMEM208Q9BTX3 173 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 MAGT1Q9H0U3 335 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 GOLT1BQ9Y3E0 138 aa3.58□□□□□ -1.84
PTCD3-219ENST00000494323 HSPG2P98160 4391 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 A0A0J9YX75 114 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 FAM25AB3EWG3 89 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 FAM25CB3EWG5 89 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 FAM25GB3EWG6 89 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 ZNF701M0R085 212 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 CDS2O95674 445 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 APOA1P02647 267 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 PRB4P10163 310 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 HTN1P15515 57 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 AZU1P20160 251 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 UCP1P25874 307 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 OR2F1Q13607 317 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 ZNF79Q15937 498 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 C14orf177Q52M58 125 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 RNASE10Q5GAN6 216 aaKnown RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 EBLN2Q6P2I7 272 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 ATRAIDQ6UW56 229 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 LHFPL1Q86WI0 220 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 OR8I2Q8N0Y5 310 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 CCDC71LQ8N9Z2 235 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 OR13C8Q8NGS7 320 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 OR52E5Q8NH55 327 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 ZNRF2Q8NHG8 242 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 COQ8AQ8NI60 647 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 ZFAND1Q8TCF1 268 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 RNASEH2CQ8TDP1 164 aaKnown RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 PPP1R14BQ96C90 147 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 YIPF6Q96EC8 236 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 BCL7BQ9BQE9 202 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 RTBDNQ9BSG5 229 aaPredicted RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 TMEM222Q9H0R3 208 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 LINC00588Q9Y4M8 146 aa3.57□□□□□ -1.84
PTCD3-219ENST00000494323 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
PTCD3-219ENST00000494323 IGKV1D-37A0A075B6S9 117 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 TRAV12-2A0A075B6T6 113 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 TEX48A0A1B0GUV7 120 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 ZFP92A6NM28 416 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 SNRPGP15A8MWD9 76 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 EPM2AB3EWF7 344 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 H7C423 109 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 M0R2Z0 102 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 SOCS3O14543 225 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 GSTZ1O43708 216 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-219ENST00000494323 RAB3DO95716 219 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 FUSP35637 526 aaKnown RBP eCLIP3.56□□□□□ -1.84
PTCD3-219ENST00000494323 PSMB3P49720 205 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 CCL18P55774 89 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 LYZP61626 148 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 VBP1P61758 197 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 NCS1P62166 190 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 SPINK13Q1W4C9 94 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 MUC21Q5SSG8 566 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 ARRDC1Q8N5I2 433 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 C15orf53Q8NAA6 179 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 PCNPQ8WW12 178 aaKnown RBP3.56□□□□□ -1.84
PTCD3-219ENST00000494323 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 SLC25A22Q9H936 323 aa3.56□□□□□ -1.84
PTCD3-219ENST00000494323 DMBT1Q9UGM3 2413 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-219ENST00000494323 FLG2Q5D862 2391 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 CCDC160A6NGH7 325 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 ISLRO14498 428 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 CRXO43186 299 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 GATA2P23769 480 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 ALDH3B2P48448 385 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 SUPT4H1P63272 117 aaKnown RBP3.55□□□□□ -1.84
PTCD3-219ENST00000494323 SRPXP78539 464 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 FGL1Q08830 312 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 OR5I1Q13606 314 aa3.55□□□□□ -1.84
PTCD3-219ENST00000494323 CLINT1Q14677 625 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms