RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RASL10AQ92737 203 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 CLDN23Q96B33 292 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 SIGMAR1Q99720 223 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 SMIM7Q9BQ49 75 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 PPP1R3CQ9UQK1 317 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 TSSC4Q9Y5U2 329 aaPredicted RBP1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 MPC1Q9Y5U8 109 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 TMEM178BH3BS89 294 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 CBLN1P23435 193 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 DSCR4P56555 118 aaPredicted RBP1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 UBE2G1P62253 170 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 BATFQ16520 125 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 FAM201AQ5SY85 155 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 LCE3CQ5T5A8 94 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 C1orf189Q5VU69 101 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 LYPD5Q6UWN5 251 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 ZNF705AQ6ZN79 300 aaPredicted RBP1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 OR1B1Q8NGR6 318 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 VAMP8Q9BV40 100 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 KLRF1Q9NZS2 232 aa1.91□□□□□ -2.1
CDC42EP3-205ENST00000494083 SPTBP11277 2137 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 IGHV1OR21-1A0A087WYE8 117 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 K7EM74 188 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 M0R135 149 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 KIR2DS2P43631 304 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 DIAPH2-AS1Q14236 149 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 SPATA31B1PQ5VZV4 182 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 MDS2Q8NDY4 140 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 OR13A1Q8NGR1 328 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 ZNF799Q96GE5 643 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 SLC25A39Q9BZJ4 359 aaPredicted RBP1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 ARRDC1-AS1Q9H2J1 176 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 ZNF586Q9NXT0 402 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 PSENENQ9NZ42 101 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 GNG13Q9P2W3 67 aa1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 NXT1Q9UKK6 140 aaKnown RBP1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 LSM5Q9Y4Y9 91 aaKnown RBP1.9□□□□□ -2.1
CDC42EP3-205ENST00000494083 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGLV3-9A0A075B6K5 115 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 MUC21A0A0G2JKD1 596 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 MUC21A0A140T8X8 626 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 J3QT63 122 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 K7EMI3 77 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC31A1O15431 190 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 CRLF1O75462 422 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 IFNA5P01569 189 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 GP1BBP13224 206 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 HBG1P69891 147 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 HBG2P69892 147 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 HSD52Q0P140 79 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 GCSAMLQ5JQS6 135 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 MUC21Q5SSG8 566 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM78BQ5VT40 261 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 SHISA6Q6ZSJ9 500 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q86TA4 180 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 FMC1Q96HJ9 113 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 HSD17B10Q99714 261 aaKnown RBP1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 MCRIP2Q9BUT9 160 aaKnown RBP1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF430Q9H8G1 570 aaPredicted RBP1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 FZR1Q9UM11 496 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 V9GYY9 64 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 RP1P56715 2156 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 AKAP13Q12802 2813 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 PRRC2BQ5JSZ5 2229 aaKnown RBP1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 WNT9BO14905 357 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 P0DMU3 169 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM231AP0DMU4 169 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM231CP0DMU5 169 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 GUCA1AP43080 201 aaPredicted RBP1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 C1orf61Q13536 156 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF542PQ5EBM4 170 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 CENPWQ5EE01 88 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 AMTNQ6UX39 209 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 LYPD1Q8N2G4 141 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPRMLQ8N4K4 120 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 KLHDC1Q8N7A1 406 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR4X2Q8NGF9 303 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 PTH2Q96A98 100 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 DEFB126Q9BYW3 111 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC39A9Q9NUM3 307 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 PLEKHJ1Q9NW61 149 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 CLCF1Q9UBD9 225 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 CACNG5Q9UF02 275 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 KIF25-AS1Q9Y6Z4 181 aa1.9□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGLV4-69A0A075B6H9 119 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV7-4-1A0A0J9YVY3 117 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A0J9YW62 118 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 C12orf77C9JDV5 145 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV3-7P01780 117 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 CRYGDP07320 174 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 CRISP2P16562 243 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 USF1P22415 310 aaPredicted RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 CRYBA4P53673 196 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00315P59091 139 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPL31P62899 125 aaKnown RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 KLRB1Q12918 225 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC25A48Q6ZT89 311 aaKnown RBP1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 C5orf38Q86SI9 138 aa1.89□□□□□ -2.11
CDC42EP3-205ENST00000494083 METTL27Q8N6F8 245 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms