RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 TMEM250H0YL14 139 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 M0R3E3 92 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 ID1P41134 155 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 GNG5P63218 68 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 LCN12Q6JVE5 192 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 RNF182Q8N6D2 247 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 CMTM2Q8TAZ6 248 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 MRPL53Q96EL3 112 aaKnown RBP8.55□□□□□ -1.04
MCF2L-231ENST00000494043 C20orf173Q96LM9 149 aa8.55□□□□□ -1.04
MCF2L-231ENST00000494043 OR4C46A6NHA9 309 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 PEX7O00628 323 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 CSN1S1P47710 185 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 PSG3Q16557 428 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 FAM24BQ8N5W8 94 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 ARL6IP6Q8N6S5 226 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 CYB561D1Q8N8Q1 229 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 CITED4Q96RK1 184 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 ATG101Q9BSB4 218 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 SLC35B3Q9H1N7 401 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 EPDR1Q9UM22 224 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 RPH3ALQ9UNE2 315 aa8.54□□□□□ -1.04
MCF2L-231ENST00000494043 TRRAPQ9Y4A5 3859 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 ZNF705FA8MVS1 300 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-231ENST00000494043 TCRAP04437 139 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 SFTA3P0C7M3 94 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 ZNF688P0C7X2 276 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
MCF2L-231ENST00000494043 GUCA2BQ16661 112 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 ZNF738Q8NE65 137 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 LINC00052Q96N35 136 aa8.53□□□□□ -1.04
MCF2L-231ENST00000494043 ZNF256Q9Y2P7 627 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-231ENST00000494043 SERTM2A0A1B0GWG4 89 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 TMEM218A2RU14 115 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 DIRC3C9JPN6 131 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 WIPF1O43516 503 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 IGLL1P15814 213 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 AKR1C3P42330 323 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 CEBPGP53567 150 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 PSMG4Q5JS54 123 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 PRR31Q5SQ13 230 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 GOLT1AQ6ZVE7 132 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 RPUSD4Q96CM3 377 aaKnown RBP8.52□□□□□ -1.05
MCF2L-231ENST00000494043 GPR61Q9BZJ8 451 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
MCF2L-231ENST00000494043 IGKV2-40A0A087WW87 121 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-231ENST00000494043 PRAC2D3DTV9 90 aa8.51□□□□□ -1.05
MCF2L-231ENST00000494043 K7EQM0 130 aa8.51□□□□□ -1.05
MCF2L-231ENST00000494043 IGKV2D-40P01614 121 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-231ENST00000494043 PRB4P10163 310 aaPredicted RBP8.51□□□□□ -1.05
MCF2L-231ENST00000494043 CNN1P51911 297 aaKnown RBP8.51□□□□□ -1.05
MCF2L-231ENST00000494043 BEAN1Q3B7T3 259 aa8.51□□□□□ -1.05
MCF2L-231ENST00000494043 DERL1Q9BUN8 251 aa8.51□□□□□ -1.05
MCF2L-231ENST00000494043 MAP6D1Q9H9H5 199 aa8.51□□□□□ -1.05
MCF2L-231ENST00000494043 RBAKDNA6NC62 111 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 RPL35P42766 123 aaKnown RBP8.5□□□□□ -1.05
MCF2L-231ENST00000494043 ZNF674Q2M3X9 581 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 SOHLH1Q5JUK2 328 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 TMEM75Q8N9X5 138 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 FMC1Q96HJ9 113 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 LINC00479Q96M42 142 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 PARLQ9H300 379 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 KLF12Q9Y4X4 402 aa8.5□□□□□ -1.05
MCF2L-231ENST00000494043 CMYA5Q8N3K9 4069 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 TRAV8-1A0A0A6YYK1 113 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 TRAV34A0A0B4J273 112 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
MCF2L-231ENST00000494043 ADCYAP1P18509 176 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 DEFB131AP59861 70 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 DEFB1P60022 68 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 UBE2G1P62253 170 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 ODF3L2Q3SX64 289 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 FAM74A3Q4VXF1 159 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 OR8A1Q8NGG7 326 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 SMIM7Q9BQ49 75 aa8.49□□□□□ -1.05
MCF2L-231ENST00000494043 NOTCH3Q9UM47 2321 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 A0A0J9YX75 114 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 TRBV6-1A0A0K0K1D8 114 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
MCF2L-231ENST00000494043 ZNF727A8MUV8 499 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 OR11H12B2RN74 326 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 F6UB75 175 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 F8W036 122 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-231ENST00000494043 TAS2R60P59551 318 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 FLI1Q01543 452 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-231ENST00000494043 HIST1H1AQ02539 215 aaPredicted RBP8.48□□□□□ -1.05
MCF2L-231ENST00000494043 ERCC8Q13216 396 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 Q86TA4 180 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 OR10J6PQ8NGY7 276 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 SGK494Q96LW2 274 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 IGF2BP2-AS1Q96M15 143 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 VGLL1Q99990 258 aa8.48□□□□□ -1.05
MCF2L-231ENST00000494043 FAM110AQ9BQ89 295 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms