RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
HDAC6-234ENST00000493923 HDHD3Q9BSH5 251 aaPredicted RBP6.43□□□□□ -1.38
HDAC6-234ENST00000493923 MAP1LC3CQ9BXW4 147 aa6.43□□□□□ -1.38
HDAC6-234ENST00000493923 NPVFQ9HCQ7 196 aa6.43□□□□□ -1.38
HDAC6-234ENST00000493923 SPCS1Q9Y6A9 102 aa6.43□□□□□ -1.38
HDAC6-234ENST00000493923 TRAV24A0A0B4J272 114 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 A0A0G2JLM5 398 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 C2orf70A6NJV1 201 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 F2Z2F3 143 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 F8W1H4 67 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 H3BP45 60 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 HSPB6O14558 160 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 RAB29O14966 203 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 PGLYRP1O75594 196 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-234ENST00000493923 NAPSAO96009 420 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 IGKV1D-33P01593 117 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 IGKV1-33P01594 117 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 STAG3L2P0CL84 134 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 VDAC2P45880 294 aaPredicted RBP6.42□□□□□ -1.38
HDAC6-234ENST00000493923 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
HDAC6-234ENST00000493923 PIGYQ3MUY2 71 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 TIGITQ495A1 244 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 SPANXN5Q5MJ07 72 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 MINOS1Q5TGZ0 78 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 C18orf65Q6ZTR6 163 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 ERASQ7Z444 233 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 LINC00596Q86U02 117 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 Q8IYB0 196 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 OR13A1Q8NGR1 328 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 OCC1Q8TAD7 63 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 NPCDR1Q9BY65 106 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 PRSS22Q9GZN4 317 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 GTSF1LQ9H1H1 148 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 OR2D2Q9H210 308 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 DPM3Q9P2X0 92 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 CACNG5Q9UF02 275 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 MINOS1-NBL1R4GNA1 71 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 V9GYV3 84 aa6.42□□□□□ -1.38
HDAC6-234ENST00000493923 KMT2CQ8NEZ4 4911 aaKnown RBP6.42□□□□□ -1.38
HDAC6-234ENST00000493923 LOC100996750A0A140TA64 210 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 SMIM27A0A1W2PRY6 76 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 NPIPB11E5RHQ5 1161 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 SYS1-DBNDD2H3BUS1 97 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 APOA2P02652 100 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 IAPPP10997 89 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 ARL16Q0P5N6 197 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 CCDC144NLQ6NUI1 221 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 ZNF818PQ6ZRF7 136 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 NDUFA11Q86Y39 141 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 ATOH7Q8N100 152 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 RFESDQ8TAC1 157 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 UBALD1Q8TB05 177 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 GPR82Q96P67 336 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 RCHY1Q96PM5 261 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 RABAC1Q9UI14 185 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 JPT1Q9UK76 154 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 CYSLTR1Q9Y271 337 aa6.41□□□□□ -1.38
HDAC6-234ENST00000493923 TENM3Q9P273 2699 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
HDAC6-234ENST00000493923 TRBV6-6A0A0A6YYG2 114 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 BUB1B-PAK6H3BSN5 160 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 OR7C1O76099 320 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-234ENST00000493923 SSTR5P35346 364 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 OPRK1P41145 380 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 ATP5G3P48201 142 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 RBM11P57052 281 aaKnown RBP6.4□□□□□ -1.38
HDAC6-234ENST00000493923 KRTAP10-11P60412 298 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 LCN12Q6JVE5 192 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 EBLN2Q6P2I7 272 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 RNASEKQ6P5S7 137 aaKnown RBP6.4□□□□□ -1.38
HDAC6-234ENST00000493923 TTC9CQ8N5M4 171 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 ZBTB34Q8NCN2 500 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 GATAD1Q8WUU5 269 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 BLNKQ8WV28 456 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 RAX2Q96IS3 184 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 SLC25A33Q9BSK2 321 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 FNDC4Q9H6D8 234 aaPredicted RBP6.4□□□□□ -1.38
HDAC6-234ENST00000493923 TMEM167BQ9NRX6 74 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 CALYQ9NYX4 217 aa6.4□□□□□ -1.38
HDAC6-234ENST00000493923 KBTBD11-OT1A0A1B0GTJ5 212 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 A0A1W2PPI3 338 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 LINC01548A6NM66 108 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 H3BUT2 72 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 K7EIL1 84 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 CLEC3BP05452 202 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 ARL3P36405 182 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 GPR12P47775 334 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 TNXAQ16473 311 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 FAM231DQ6ZW35 169 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 SPATA12Q7Z6I5 190 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 FAM19A2Q8N3H0 131 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 DRAM1Q8N682 238 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 ZNF114Q8NC26 417 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 ATP6V0E2Q8NHE4 81 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 ZNF502Q8TBZ5 544 aa6.39□□□□□ -1.39
HDAC6-234ENST00000493923 CCL28Q9NRJ3 127 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms