RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 PRAC2D3DTV9 90 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 IFNA5P01569 189 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 SPART-AS1P0CW21 52 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 PYYP10082 97 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 RRN3P1Q2M238 152 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 OR10J6PQ8NGY7 276 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 FAM167A-AS1Q96KT0 104 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 SMIM3Q9BZL3 60 aa16.21■□□□□ 0.19
SNIP1-203ENST00000493916 LOC102723971A0A1B0GUV8 181 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 NDUFB4O95168 129 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 LY6G6CO95867 125 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 PRB4P10163 310 aaPredicted RBP16.2■□□□□ 0.18
SNIP1-203ENST00000493916 EMP1P54849 157 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 MIR17HGQ75NE6 70 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 SCGB1C1Q8TD33 95 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 ASB13Q8WXK3 278 aa16.2■□□□□ 0.18
SNIP1-203ENST00000493916 TRAV12-2A0A075B6T6 113 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 CDKN1BP46527 198 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 TMEM256Q8N2U0 113 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 DKK2Q9UBU2 259 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 FUT9Q9Y231 359 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 TIMM9Q9Y5J7 89 aa16.19■□□□□ 0.18
SNIP1-203ENST00000493916 RGS21Q2M5E4 152 aa16.18■□□□□ 0.18
SNIP1-203ENST00000493916 ZNF767PQ75MW2 155 aa16.18■□□□□ 0.18
SNIP1-203ENST00000493916 WFDC1Q9HC57 220 aa16.18■□□□□ 0.18
SNIP1-203ENST00000493916 PRELID1Q9Y255 219 aa16.18■□□□□ 0.18
SNIP1-203ENST00000493916 IGLL5B9A064 214 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 NPIPB6E9PJ23 425 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 TSPOP30536 169 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 FFAR4Q5NUL3 377 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 FAM222AQ5U5X8 452 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 LGALS9CQ6DKI2 356 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 RPP25LQ8N5L8 163 aaKnown RBP16.17■□□□□ 0.18
SNIP1-203ENST00000493916 ODF3Q96PU9 254 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 OR51M1Q9H341 326 aa16.17■□□□□ 0.18
SNIP1-203ENST00000493916 YTHDF2Q9Y5A9 579 aaKnown RBP16.17■□□□□ 0.18
SNIP1-203ENST00000493916 DEFB131BA0A096LNP1 70 aa16.16■□□□□ 0.18
SNIP1-203ENST00000493916 GIPP09681 153 aaPredicted RBP16.16■□□□□ 0.18
SNIP1-203ENST00000493916 BLNKQ8WV28 456 aa16.16■□□□□ 0.18
SNIP1-203ENST00000493916 ZNF705GA8MUZ8 300 aaPredicted RBP16.15■□□□□ 0.18
SNIP1-203ENST00000493916 M0R3E3 92 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 OXA1LQ15070 435 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 FXYD5Q96DB9 178 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 AQP10Q96PS8 301 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 C20orf144Q9BQM9 153 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 PAXXQ9BUH6 204 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 APLNQ9ULZ1 77 aa16.15■□□□□ 0.18
SNIP1-203ENST00000493916 NBEAP1P0C6P0 100 aa16.14■□□□□ 0.17
SNIP1-203ENST00000493916 TAS2R60P59551 318 aa16.14■□□□□ 0.17
SNIP1-203ENST00000493916 NIPSNAP3BQ9BS92 247 aa16.14■□□□□ 0.17
SNIP1-203ENST00000493916 AAMDCQ9H7C9 122 aa16.14■□□□□ 0.17
SNIP1-203ENST00000493916 IGHV4-4A0A075B6R2 117 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 CT45A10P0DMU9 189 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 LEPP41159 167 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 EXOC3-AS1Q8N2X6 119 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 RNF141Q8WVD5 230 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 LINC01587Q99440 93 aa16.13■□□□□ 0.17
SNIP1-203ENST00000493916 VPS13DQ5THJ4 4388 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 OR7C2O60412 319 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 PRM2P04554 102 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 OR10J4P0C629 311 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 ZNF266Q14584 549 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 KHDC3LQ587J8 217 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 GFI1BQ5VTD9 330 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 ZNF503Q96F45 646 aa16.12■□□□□ 0.17
SNIP1-203ENST00000493916 PLAC8L1A1L4L8 177 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 LYRM9A8MSI8 78 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 H7BYZ3 331 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 TAS2R45P59539 299 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 ICAM4Q14773 271 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 KIR3DS1Q14943 382 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 Q5BKY6 102 aa16.11■□□□□ 0.17
SNIP1-203ENST00000493916 AZU1P20160 251 aa16.1■□□□□ 0.17
SNIP1-203ENST00000493916 M6PRP20645 277 aa16.1■□□□□ 0.17
SNIP1-203ENST00000493916 UBE2L3P68036 154 aaKnown RBP16.1■□□□□ 0.17
SNIP1-203ENST00000493916 ACOT6Q3I5F7 207 aaPredicted RBP16.1■□□□□ 0.17
SNIP1-203ENST00000493916 PHYHIPLQ96FC7 376 aa16.1■□□□□ 0.17
SNIP1-203ENST00000493916 C16orf74Q96GX8 76 aa16.1■□□□□ 0.17
SNIP1-203ENST00000493916 LINC00477Q96M19 166 aa16.1■□□□□ 0.17
SNIP1-203ENST00000493916 LYPD1Q8N2G4 141 aa16.09■□□□□ 0.17
SNIP1-203ENST00000493916 FAM19A4Q96LR4 140 aa16.09■□□□□ 0.17
SNIP1-203ENST00000493916 DAD1P61803 113 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 ERCC8Q13216 396 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 FAM122CQ6P4D5 195 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 ZNF493Q6ZR52 646 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 C9orf47Q6ZRZ4 202 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 OR2G3Q8NGZ4 309 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 AGPAT4-IT1Q9H0P7 198 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 PLA2G2EQ9NZK7 142 aa16.08■□□□□ 0.16
SNIP1-203ENST00000493916 RNASE8Q8TDE3 154 aaKnown RBP16.07■□□□□ 0.16
SNIP1-203ENST00000493916 TMEM263Q8WUH6 116 aaKnown RBP16.07■□□□□ 0.16
SNIP1-203ENST00000493916 FAM210BQ96KR6 192 aa16.07■□□□□ 0.16
SNIP1-203ENST00000493916 PSMG3Q9BT73 122 aaPredicted RBP16.07■□□□□ 0.16
SNIP1-203ENST00000493916 NDUFAF3Q9BU61 184 aa16.07■□□□□ 0.16
SNIP1-203ENST00000493916 KMT2AQ03164 3969 aa16.07■□□□□ 0.16
SNIP1-203ENST00000493916 IGKV2-40A0A087WW87 121 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-203ENST00000493916 KLLNB2CW77 178 aa16.06■□□□□ 0.16
SNIP1-203ENST00000493916 IGKV2D-40P01614 121 aaPredicted RBP16.06■□□□□ 0.16
SNIP1-203ENST00000493916 SLC25A5P05141 298 aaKnown RBP16.06■□□□□ 0.16
SNIP1-203ENST00000493916 HTN1P15515 57 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms