RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 SRSF2Q01130 221 aaKnown RBP16.21■□□□□ 0.19
RNF40-203ENST00000493683 LINC00311Q8N616 119 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 OVOL3O00110 214 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 ACACAQ13085 2346 aa16.21■□□□□ 0.19
RNF40-203ENST00000493683 EREGO14944 169 aa16.21■□□□□ 0.18
RNF40-203ENST00000493683 TAL2Q16559 108 aa16.21■□□□□ 0.18
RNF40-203ENST00000493683 C5orf24Q7Z6I8 188 aa16.21■□□□□ 0.18
RNF40-203ENST00000493683 BOD1L2Q8IYS8 172 aa16.21■□□□□ 0.18
RNF40-203ENST00000493683 IGHV1-24A0A0C4DH33 117 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 LCNL1Q6ZST4 164 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 COL8A2P25067 703 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 STPG4Q8N801 248 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 LINC00479Q96M42 142 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.2■□□□□ 0.18
RNF40-203ENST00000493683 IGFL4Q6B9Z1 124 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 SMIM27A0A1W2PRY6 76 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 F8W1H4 67 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 MLANAQ16655 118 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 UTF1Q5T230 341 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 PPDPFLQ8WWR9 84 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 HS3ST6Q96QI5 342 aa16.2■□□□□ 0.18
RNF40-203ENST00000493683 RPL35AP18077 110 aaKnown RBP16.19■□□□□ 0.18
RNF40-203ENST00000493683 GNLYP22749 145 aa16.19■□□□□ 0.18
RNF40-203ENST00000493683 C9JQL5 133 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 TMEM213A2RRL7 107 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 IGLC2P0DOY2 106 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 IGLC3P0DOY3 106 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 PAX9P55771 341 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 SLAQ13239 276 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 UNQ6494/PRO21346Q6UXR6 183 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 PRR31Q5SQ13 230 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 LINC00205P59089 165 aa16.18■□□□□ 0.18
RNF40-203ENST00000493683 V9GYV3 84 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 ABCA1O95477 2261 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 PRB4P10163 310 aaPredicted RBP16.17■□□□□ 0.18
RNF40-203ENST00000493683 COX8AP10176 69 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 ARHGEF17Q96PE2 2063 aaPredicted RBP16.17■□□□□ 0.18
RNF40-203ENST00000493683 TRBV25-1A0A075B6N4 114 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 CFHR2P36980 270 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 E7EQL1 145 aa16.17■□□□□ 0.18
RNF40-203ENST00000493683 C11orf52Q96A22 123 aa16.16■□□□□ 0.18
RNF40-203ENST00000493683 DEFB131AP59861 70 aa16.16■□□□□ 0.18
RNF40-203ENST00000493683 UBE2E2Q96LR5 201 aa16.16■□□□□ 0.18
RNF40-203ENST00000493683 H3BRN7 92 aa16.16■□□□□ 0.18
RNF40-203ENST00000493683 NDUFA4O00483 81 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 C1orf147Q96MC9 270 aaPredicted RBP16.15■□□□□ 0.18
RNF40-203ENST00000493683 ATP6V0E1O15342 81 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 PSCAO43653 123 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 SYNJ2BPP57105 145 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 IGHV1OR15-1A0A075B7D0 117 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 BPESC1Q9GZL8 116 aa16.15■□□□□ 0.18
RNF40-203ENST00000493683 SIVA1O15304 175 aa16.14■□□□□ 0.18
RNF40-203ENST00000493683 MRPL51Q4U2R6 128 aaKnown RBP16.14■□□□□ 0.18
RNF40-203ENST00000493683 PRR25Q96S07 402 aa16.14■□□□□ 0.18
RNF40-203ENST00000493683 PYGO2Q9BRQ0 406 aa16.14■□□□□ 0.17
RNF40-203ENST00000493683 MSRB2Q9Y3D2 182 aa16.14■□□□□ 0.17
RNF40-203ENST00000493683 C8orf49Q96NF6 230 aa16.14■□□□□ 0.17
RNF40-203ENST00000493683 SNHG12Q9BXW3 62 aa16.14■□□□□ 0.17
RNF40-203ENST00000493683 RBMY1FQ15415 496 aaKnown RBP16.14■□□□□ 0.17
RNF40-203ENST00000493683 K7EP34 96 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 C9orf153Q5TBE3 101 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 MCRIP2Q9BUT9 160 aaKnown RBP16.13■□□□□ 0.17
RNF40-203ENST00000493683 HLA-DRB4P13762 266 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 HAPLN4Q86UW8 402 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 HLA-DRB4X5D2U9 266 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 BRWD3Q6RI45 1802 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 LINC01619G3V211 115 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 MSMBP08118 114 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 GAGE1Q13065 139 aa16.13■□□□□ 0.17
RNF40-203ENST00000493683 DKK1O94907 266 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 TEX36Q5VZQ5 186 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 K7EM74 188 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 IGHV2-5P01817 119 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 ZNF726P1Q15940 193 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 THAP8Q8NA92 274 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 C20orf78Q9BR46 151 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 UBL5Q9BZL1 73 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 SDHAF1A6NFY7 115 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 ZNF114Q8NC26 417 aa16.12■□□□□ 0.17
RNF40-203ENST00000493683 ZNF625Q96I27 306 aaPredicted RBP16.12■□□□□ 0.17
RNF40-203ENST00000493683 SPANXCQ9NY87 97 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 IGHV1-69DA0A0B4J2H0 117 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 E9PQ18 207 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 IGHV1-69P01742 117 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 C8orf86Q6ZUL3 223 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 CYYR1Q96J86 154 aa16.11■□□□□ 0.17
RNF40-203ENST00000493683 IGHV2-70P01814 119 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 Q6ZWC4 215 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 DEFB104AQ8WTQ1 72 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 K7EMI3 77 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 C17orf58Q2M2W7 97 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 ZNF561-AS1K7EIQ3 104 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 C1orf122Q6ZSJ8 110 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 SELENOKQ9Y6D0 94 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 POLEQ07864 2286 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 RPL32P62910 135 aaKnown RBP16.1■□□□□ 0.17
RNF40-203ENST00000493683 TCF15Q12870 199 aa16.1■□□□□ 0.17
RNF40-203ENST00000493683 F8VRH5 84 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 TMEM243Q9BU79 118 aa16.09■□□□□ 0.17
RNF40-203ENST00000493683 SMIM2Q9BVW6 85 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms