RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 MORN5Q5VZ52 161 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 CCDC190Q86UF4 302 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 BPIFA4PQ86YQ2 179 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 ZBTB8BQ8NAP8 495 aaPredicted RBP12.02□□□□□ -0.49
COL9A1-210ENST00000493682 SCRT2Q9NQ03 307 aa12.02□□□□□ -0.49
COL9A1-210ENST00000493682 H3BNG1 76 aa12.01□□□□□ -0.49
COL9A1-210ENST00000493682 OR4E1P0C645 316 aa12.01□□□□□ -0.49
COL9A1-210ENST00000493682 TAS2R30P59541 319 aa12.01□□□□□ -0.49
COL9A1-210ENST00000493682 IAH1Q2TAA2 248 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-210ENST00000493682 TMEM37Q8WXS4 190 aa12.01□□□□□ -0.49
COL9A1-210ENST00000493682 RCL1Q9Y2P8 373 aaKnown RBP12.01□□□□□ -0.49
COL9A1-210ENST00000493682 MRPS16Q9Y3D3 137 aaKnown RBP12.01□□□□□ -0.49
COL9A1-210ENST00000493682 A0A1W2PPQ1 181 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 SNURFLB1AK76 121 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 COX7A2P2O60397 106 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 IGLC2P0DOY2 106 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 BTF3P20290 206 aaKnown RBP12□□□□□ -0.49
COL9A1-210ENST00000493682 OPCMLQ14982 345 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 MGST2Q99735 147 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 GGACTQ9BVM4 153 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
COL9A1-210ENST00000493682 TRAV12-3A0A0B4J271 114 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 LINC00854A0A1B0GVQ3 168 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 H3BQ15 152 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 J3KRW8 73 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 C4orf46Q504U0 113 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 C10orf113Q5VZT2 155 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 SAT2Q96F10 170 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-210ENST00000493682 SRRQ9GZT4 340 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 ZNF586Q9NXT0 402 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 GSKIPQ9P0R6 139 aa11.99□□□□□ -0.49
COL9A1-210ENST00000493682 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
COL9A1-210ENST00000493682 NAP1L6A6NFF2 107 aa11.98□□□□□ -0.49
COL9A1-210ENST00000493682 LEPP41159 167 aa11.98□□□□□ -0.49
COL9A1-210ENST00000493682 DAZ2Q13117 558 aaKnown RBP11.98□□□□□ -0.49
COL9A1-210ENST00000493682 Q6ZTI0 123 aa11.98□□□□□ -0.49
COL9A1-210ENST00000493682 ODF3Q96PU9 254 aa11.98□□□□□ -0.49
COL9A1-210ENST00000493682 C7orf66A4D0T2 115 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-210ENST00000493682 INPP1P49441 399 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 BAK1Q16611 211 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 SPANXN2Q5MJ10 180 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 ZNF431Q8TF32 576 aaPredicted RBP11.97□□□□□ -0.49
COL9A1-210ENST00000493682 VSIG2Q96IQ7 327 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 PYGO2Q9BRQ0 406 aa11.97□□□□□ -0.49
COL9A1-210ENST00000493682 DNAH5Q8TE73 4624 aa11.96□□□□□ -0.49
COL9A1-210ENST00000493682 TRAV5A0A0B4J249 113 aa11.96□□□□□ -0.49
COL9A1-210ENST00000493682 DNAJC4Q9NNZ3 241 aa11.96□□□□□ -0.49
COL9A1-210ENST00000493682 A0A096LPF7 62 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 CAMLGP49069 296 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 LINC00315P59091 139 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 GUK1Q16774 197 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 MITD1Q8WV92 249 aa11.95□□□□□ -0.5
COL9A1-210ENST00000493682 TRGV2A0A075B6R0 118 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 CCDC160A6NGH7 325 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 BTCP35070 178 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 RAB31Q13636 194 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 MIC13Q5XKP0 118 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 Q6ZRG5 221 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 Q6ZRN7 208 aaPredicted RBP11.94□□□□□ -0.5
COL9A1-210ENST00000493682 NRARPQ7Z6K4 114 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 C11orf72Q8NBR9 251 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 GSN-AS1Q9NRJ2 163 aa11.94□□□□□ -0.5
COL9A1-210ENST00000493682 L7N2F9 121 aa11.93□□□□□ -0.5
COL9A1-210ENST00000493682 SLC25A5P05141 298 aaKnown RBP11.93□□□□□ -0.5
COL9A1-210ENST00000493682 VAMP2P63027 116 aa11.93□□□□□ -0.5
COL9A1-210ENST00000493682 C18orf15Q96N68 181 aa11.93□□□□□ -0.5
COL9A1-210ENST00000493682 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 C7orf71A4D174 169 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 ZNF253O75346 499 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 ERCC8Q13216 396 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 ZNF680Q8NEM1 530 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 OR1L4Q8NGR5 311 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 MRPL53Q96EL3 112 aaKnown RBP11.92□□□□□ -0.5
COL9A1-210ENST00000493682 SDHCQ99643 169 aaPredicted RBP11.92□□□□□ -0.5
COL9A1-210ENST00000493682 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 WDR83OSQ9Y284 106 aa11.92□□□□□ -0.5
COL9A1-210ENST00000493682 CENPXA8MT69 81 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 KLLNB2CW77 178 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 M0R3E3 92 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 CCSO14618 274 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 ZNF324O75467 553 aaPredicted RBP11.91□□□□□ -0.5
COL9A1-210ENST00000493682 CST7O76096 145 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 BCAP31P51572 246 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 CD300CQ08708 224 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 PFDN5Q99471 154 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 LINC00467Q9BRT7 94 aa11.91□□□□□ -0.5
COL9A1-210ENST00000493682 LSM5Q9Y4Y9 91 aaKnown RBP11.91□□□□□ -0.5
COL9A1-210ENST00000493682 TRBV19A0A075B6N1 114 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 SIVA1O15304 175 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 CAV2P51636 162 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 BTN1A1Q13410 526 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 ZNF846Q147U1 533 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 ANXA2RQ3ZCQ2 193 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 FAM19A4Q96LR4 140 aa11.9□□□□□ -0.5
COL9A1-210ENST00000493682 UQCC1Q9NVA1 299 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms