RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 C6orf223Q8N319 242 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 OR1L4Q8NGR5 311 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 ODF3Q96PU9 254 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 PFDN5Q99471 154 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 UQCC1Q9NVA1 299 aa11.62□□□□□ -0.55
PTPRU-208ENST00000493601 C5orf51A6NDU8 294 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 PRAC2D3DTV9 90 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 H3BQ15 152 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 CST7O76096 145 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 PVALBP20472 110 aaPredicted RBP11.61□□□□□ -0.55
PTPRU-208ENST00000493601 LEPP41159 167 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 KIR3DS1Q14943 382 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 ZNF431Q8TF32 576 aaPredicted RBP11.61□□□□□ -0.55
PTPRU-208ENST00000493601 SAT2Q96F10 170 aaPredicted RBP11.61□□□□□ -0.55
PTPRU-208ENST00000493601 PARD6GQ9BYG4 376 aaPredicted RBP11.61□□□□□ -0.55
PTPRU-208ENST00000493601 NUDT15Q9NV35 164 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 WDR83OSQ9Y284 106 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 LINC00588Q9Y4M8 146 aa11.61□□□□□ -0.55
PTPRU-208ENST00000493601 TRAV6A0A075B6T7 132 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 SNURFLB1AK76 121 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 PLA2G10O15496 165 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 ZNF253O75346 499 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 RLN2P04090 185 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 TCRBP04435 133 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 VWC2Q2TAL6 325 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 MIC13Q5XKP0 118 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 SSX7Q7RTT5 188 aa11.6□□□□□ -0.55
PTPRU-208ENST00000493601 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
PTPRU-208ENST00000493601 TRAV26-1A0A087WT03 109 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 UBE2L5PA0A1B0GUS4 154 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 J3KRW8 73 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 M6PRP20645 277 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 TNP2Q05952 138 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 BAXQ07812 192 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 OR5I1Q13606 314 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 STX12Q86Y82 276 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 C12orf45Q8N5I9 185 aaPredicted RBP11.59□□□□□ -0.55
PTPRU-208ENST00000493601 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 C2orf50Q96LR7 162 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 C11orf1Q9H5F2 150 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 LYRM2Q9NU23 88 aaPredicted RBP11.59□□□□□ -0.55
PTPRU-208ENST00000493601 SLC39A9Q9NUM3 307 aa11.59□□□□□ -0.55
PTPRU-208ENST00000493601 TRAV5A0A0B4J249 113 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 FAM24AA6NFZ4 105 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 GAGE7O76087 117 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 GAGE12FP0CL80 117 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 GAGE12GP0CL81 117 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 GAGE12IP0CL82 117 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 CT45A10P0DMU9 189 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 S100A11P31949 105 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.56
PTPRU-208ENST00000493601 SULT1A1P50225 295 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 S100A10P60903 97 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 HBG1P69891 147 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 HBG2P69892 147 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 RXFP4Q8TDU9 374 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
PTPRU-208ENST00000493601 SEC22CQ9BRL7 303 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 PYGO2Q9BRQ0 406 aa11.58□□□□□ -0.56
PTPRU-208ENST00000493601 C16orf90A8MZG2 172 aa11.57□□□□□ -0.56
PTPRU-208ENST00000493601 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
PTPRU-208ENST00000493601 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
PTPRU-208ENST00000493601 TRBV19A0A075B6N1 114 aa11.56□□□□□ -0.56
PTPRU-208ENST00000493601 H3BNG1 76 aa11.56□□□□□ -0.56
PTPRU-208ENST00000493601 CHAC2Q8WUX2 184 aa11.56□□□□□ -0.56
PTPRU-208ENST00000493601 Q9H8V8 135 aa11.56□□□□□ -0.56
PTPRU-208ENST00000493601 TMEM14CQ9P0S9 112 aa11.56□□□□□ -0.56
PTPRU-208ENST00000493601 A0A0J9YY99 117 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 IGSF23A1L1A6 192 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 C7orf71A4D174 169 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 MPDU1O75352 247 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 SLC25A5P05141 298 aaKnown RBP11.55□□□□□ -0.56
PTPRU-208ENST00000493601 HOXA5P20719 270 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 FGF7P21781 194 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 DAZ2Q13117 558 aaKnown RBP11.55□□□□□ -0.56
PTPRU-208ENST00000493601 PDE6HQ13956 83 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 TMEM252Q8N6L7 170 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 ZNF680Q8NEM1 530 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 CCDC32Q9BV29 185 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
PTPRU-208ENST00000493601 RYR1P21817 5038 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 H2AFB2P0C5Z0 115 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 RAB32Q13637 225 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 ATP6V1FQ16864 119 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 UPK3BQ9BT76 320 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 Q9H3A6 140 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 TMPRSS5Q9H3S3 457 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 GPN1Q9HCN4 374 aaPredicted RBP11.54□□□□□ -0.56
PTPRU-208ENST00000493601 TIMM9Q9Y5J7 89 aa11.54□□□□□ -0.56
PTPRU-208ENST00000493601 M0R3E3 92 aa11.53□□□□□ -0.56
PTPRU-208ENST00000493601 CDK2AP2O75956 126 aa11.53□□□□□ -0.56
PTPRU-208ENST00000493601 HIST1H1EP10412 219 aaKnown RBP11.53□□□□□ -0.56
PTPRU-208ENST00000493601 Q6ZTI0 123 aa11.53□□□□□ -0.56
PTPRU-208ENST00000493601 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
PTPRU-208ENST00000493601 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
PTPRU-208ENST00000493601 NDUFA13Q9P0J0 144 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms