RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 YTHDF2Q9Y5A9 579 aaKnown RBP10.01□□□□□ -0.81
MSH6-208ENST00000493177 A0A1W2PRE2 83 aa10□□□□□ -0.81
MSH6-208ENST00000493177 FAM74A7A6NL05 159 aa10□□□□□ -0.81
MSH6-208ENST00000493177 IGHV4-30-4P0DP06 118 aa10□□□□□ -0.81
MSH6-208ENST00000493177 CD81P60033 236 aa10□□□□□ -0.81
MSH6-208ENST00000493177 HAGHQ16775 308 aa10□□□□□ -0.81
MSH6-208ENST00000493177 LYPD1Q8N2G4 141 aa10□□□□□ -0.81
MSH6-208ENST00000493177 ZNF738Q8NE65 137 aa10□□□□□ -0.81
MSH6-208ENST00000493177 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
MSH6-208ENST00000493177 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
MSH6-208ENST00000493177 C20orf173Q96LM9 149 aa10□□□□□ -0.81
MSH6-208ENST00000493177 CLEC5AQ9NY25 188 aa10□□□□□ -0.81
MSH6-208ENST00000493177 RPH3ALQ9UNE2 315 aa10□□□□□ -0.81
MSH6-208ENST00000493177 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
MSH6-208ENST00000493177 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
MSH6-208ENST00000493177 PRB4P10163 310 aaPredicted RBP9.99□□□□□ -0.81
MSH6-208ENST00000493177 CSN1S1P47710 185 aa9.99□□□□□ -0.81
MSH6-208ENST00000493177 CMC4P56277 68 aaPredicted RBP9.99□□□□□ -0.81
MSH6-208ENST00000493177 DEFB131AP59861 70 aa9.99□□□□□ -0.81
MSH6-208ENST00000493177 SUMO1P63165 101 aaKnown RBP9.99□□□□□ -0.81
MSH6-208ENST00000493177 PSG3Q16557 428 aa9.99□□□□□ -0.81
MSH6-208ENST00000493177 PRELID1Q9Y255 219 aa9.99□□□□□ -0.81
MSH6-208ENST00000493177 ZNF705FA8MVS1 300 aaPredicted RBP9.98□□□□□ -0.81
MSH6-208ENST00000493177 M0R3E3 92 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 CD7P09564 240 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 BCL2P10415 239 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 ATP5G3P48201 142 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 TOR2AQ5JU69 321 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 RCHY1Q96PM5 261 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
MSH6-208ENST00000493177 EIF5A2Q9GZV4 153 aaKnown RBP9.98□□□□□ -0.81
MSH6-208ENST00000493177 MAP6D1Q9H9H5 199 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 ARL2-SNX15V9GYD0 113 aa9.98□□□□□ -0.81
MSH6-208ENST00000493177 LOC102723971A0A1B0GUV8 181 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 GGTLC3B5MD39 225 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 C11orf94C9JXX5 98 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 TAGLN2P37802 199 aaKnown RBP9.97□□□□□ -0.81
MSH6-208ENST00000493177 GNG5P63218 68 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 Q8N1Y9 231 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 RXFP4Q8TDU9 374 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
MSH6-208ENST00000493177 VAX2Q9UIW0 290 aa9.97□□□□□ -0.81
MSH6-208ENST00000493177 DEFB1P60022 68 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 PMS2P11Q13670 270 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 ODF3L2Q3SX64 289 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 EBLN2Q6P2I7 272 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 APRG1Q8IVJ8 170 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 C5orf17Q8NAS9 161 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 MRPL53Q96EL3 112 aaKnown RBP9.96□□□□□ -0.82
MSH6-208ENST00000493177 FAM210AQ96ND0 272 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 RARRES2Q99969 163 aa9.96□□□□□ -0.82
MSH6-208ENST00000493177 KNCNA6PVL3 124 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 PRAC2D3DTV9 90 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 F6UB75 175 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 MEF2BQ02080 365 aaPredicted RBP9.95□□□□□ -0.82
MSH6-208ENST00000493177 ZNF124Q15973 351 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 ZNF506Q5JVG8 444 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 TXNDC17Q9BRA2 123 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 WFDC10AQ9H1F0 79 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 EPDR1Q9UM22 224 aa9.95□□□□□ -0.82
MSH6-208ENST00000493177 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
MSH6-208ENST00000493177 A8MZ25 164 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 DIRC3C9JPN6 131 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 F6UZH7 168 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
MSH6-208ENST00000493177 ZNF705DP0CH99 300 aaPredicted RBP9.94□□□□□ -0.82
MSH6-208ENST00000493177 ZNF705BP0CI00 300 aaPredicted RBP9.94□□□□□ -0.82
MSH6-208ENST00000493177 HIST1H1AQ02539 215 aaPredicted RBP9.94□□□□□ -0.82
MSH6-208ENST00000493177 PEA15Q15121 130 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 ACTL10Q5JWF8 245 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 GOLT1AQ6ZVE7 132 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 OR10J6PQ8NGY7 276 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 SPATA25Q9BR10 227 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 SRD5A3Q9H8P0 318 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 C19orf73Q9NVV2 129 aa9.94□□□□□ -0.82
MSH6-208ENST00000493177 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 K7EQM0 130 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 PEX7O00628 323 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 TCRAP04437 139 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 AKR1C3P42330 323 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 CEBPGP53567 150 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 STHQ8IWL8 128 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 CCDC28AQ8IWP9 274 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 DEFB125Q8N687 156 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 OR4B1Q8NGF8 309 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 OR8A1Q8NGG7 326 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 HIST1H2BAQ96A08 127 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 ATG101Q9BSB4 218 aa9.93□□□□□ -0.82
MSH6-208ENST00000493177 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
MSH6-208ENST00000493177 DNAH9Q9NYC9 4486 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 PDE6DO43924 150 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 DUSP14O95147 198 aaKnown RBP9.92□□□□□ -0.82
MSH6-208ENST00000493177 IGKV3-20P01619 116 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 ERCC8Q13216 396 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 GDF5OSQ5U4N7 250 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 COMMD7Q86VX2 200 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 ARL6IP6Q8N6S5 226 aa9.92□□□□□ -0.82
MSH6-208ENST00000493177 CYB561D1Q8N8Q1 229 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms