RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 MBP02144 154 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 AMBPP02760 352 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 ZNF345Q14585 488 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 OR11H4Q8NGC9 324 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 OR10J6PQ8NGY7 276 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 IL17DQ8TAD2 202 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
CLIP2-209ENST00000493166 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
CLIP2-209ENST00000493166 hCG_2014768A0A024R1R8 64 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 PRAC2D3DTV9 90 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 BOLA2-SMG1P6H3BVE0 249 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 M0R2Z0 102 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 MIFP14174 115 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 CDC34P49427 236 aaPredicted RBP9.28□□□□□ -0.92
CLIP2-209ENST00000493166 PQLC2Q6ZP29 291 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 KCNRGQ8N5I3 272 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 ZNF503Q96F45 646 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 PHYHIPLQ96FC7 376 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
CLIP2-209ENST00000493166 C11orf68Q9H3H3 251 aaKnown RBP9.28□□□□□ -0.92
CLIP2-209ENST00000493166 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 A0A0D9SG52 128 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 M0R3E3 92 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 DEFB4AO15263 64 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 HMGB3O15347 200 aaKnown RBP9.27□□□□□ -0.93
CLIP2-209ENST00000493166 ICAM4Q14773 271 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 ZFAND6Q6FIF0 208 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 RPP25LQ8N5L8 163 aaKnown RBP9.27□□□□□ -0.93
CLIP2-209ENST00000493166 Q8NAQ8 132 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 ST6GAL2Q96JF0 529 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 IGF2BP2-AS1Q96M15 143 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 X6R8D5 127 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 TENM2Q9NT68 2774 aa9.27□□□□□ -0.93
CLIP2-209ENST00000493166 IGHV4-28A0A0C4DH34 117 aa9.26□□□□□ -0.93
CLIP2-209ENST00000493166 KANTRA0A1W2PQU2 76 aa9.26□□□□□ -0.93
CLIP2-209ENST00000493166 INSP01308 110 aa9.26□□□□□ -0.93
CLIP2-209ENST00000493166 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
CLIP2-209ENST00000493166 ZNF705AQ6ZN79 300 aaPredicted RBP9.26□□□□□ -0.93
CLIP2-209ENST00000493166 TCTE3Q8IZS6 198 aa9.26□□□□□ -0.93
CLIP2-209ENST00000493166 TMEM208Q9BTX3 173 aa9.26□□□□□ -0.93
CLIP2-209ENST00000493166 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
CLIP2-209ENST00000493166 STARD9Q9P2P6 4700 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 RYR3Q15413 4870 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 NPIPB6E9PJ23 425 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 BCL2L11O43521 198 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 STAG3L2P0CL84 134 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 STAG3L3P0CL85 134 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 AKR1C8PQ5T2L2 129 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 CASC10Q5T4H9 136 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 BAP18Q8IXM2 172 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 LYPD1Q8N2G4 141 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 RAB24Q969Q5 203 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 Q9H3A6 140 aa9.25□□□□□ -0.93
CLIP2-209ENST00000493166 SMIM9A6NGZ8 99 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 CRXO43186 299 aaPredicted RBP9.24□□□□□ -0.93
CLIP2-209ENST00000493166 PFDN1O60925 122 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 RBMY1A1P0DJD3 496 aaKnown RBP9.24□□□□□ -0.93
CLIP2-209ENST00000493166 RBMY1CP0DJD4 496 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 TSPOP30536 169 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 CDKN1BP46527 198 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 CSN1S1P47710 185 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 PMS2P11Q13670 270 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 RBMY1FQ15415 496 aaKnown RBP9.24□□□□□ -0.93
CLIP2-209ENST00000493166 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 C1orf158Q8N1D5 194 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 NEU1Q99519 415 aa9.24□□□□□ -0.93
CLIP2-209ENST00000493166 ZNF471Q9BX82 626 aaPredicted RBP9.24□□□□□ -0.93
CLIP2-209ENST00000493166 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
CLIP2-209ENST00000493166 CXorf65A6NEN9 183 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 CXorf1O96002 111 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
CLIP2-209ENST00000493166 HBE1P02100 147 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 CT45A10P0DMU9 189 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 LEPP41159 167 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 ERCC8Q13216 396 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 FAM74A1Q5RGS3 127 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 TMUB2Q71RG4 321 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 C11orf45Q8TAV5 145 aa9.23□□□□□ -0.93
CLIP2-209ENST00000493166 CTXND1A0A1B0GTU2 59 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 C1QBP02746 253 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 GCHFRP30047 84 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 TMEM78Q5T7P6 136 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 SSX7Q7RTT5 188 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 IQCF2Q8IXL9 164 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 TMEM256Q8N2U0 113 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 CMTM2Q8TAZ6 248 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 HYLS1Q96M11 299 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
CLIP2-209ENST00000493166 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
CLIP2-209ENST00000493166 TMEM189A5PLL7 270 aa9.21□□□□□ -0.94
CLIP2-209ENST00000493166 PGPA6NDG6 321 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms