RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 WDR83OSQ9Y284 106 aa8.77□□□□□ -1.01
COL6A1-205ENST00000492851 FAM240BA0A1B0GVZ2 78 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 CCSO14618 274 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 CST7O76096 145 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 NUDT3O95989 172 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 LEPP41159 167 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 FCN2Q15485 313 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 MZT2BQ6NZ67 158 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 RNASE8Q8TDE3 154 aaKnown RBP8.76□□□□□ -1.01
COL6A1-205ENST00000492851 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
COL6A1-205ENST00000492851 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
COL6A1-205ENST00000492851 LYRM2Q9NU23 88 aaPredicted RBP8.76□□□□□ -1.01
COL6A1-205ENST00000492851 PRELID1Q9Y255 219 aa8.76□□□□□ -1.01
COL6A1-205ENST00000492851 FAM24AA6NFZ4 105 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 SNURFLB1AK76 121 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 H3BQ15 152 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 BAXQ07812 192 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 CLINT1Q14677 625 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 MIC13Q5XKP0 118 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 TMEM252Q8N6L7 170 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 ZNF503Q96F45 646 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 SLC39A9Q9NUM3 307 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 TMEM14CQ9P0S9 112 aa8.75□□□□□ -1.01
COL6A1-205ENST00000492851 NPIPB6E9PJ23 425 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 RLN2P04090 185 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 SLC25A5P05141 298 aaKnown RBP8.74□□□□□ -1.01
COL6A1-205ENST00000492851 SNRPCP09234 159 aaKnown RBP8.74□□□□□ -1.01
COL6A1-205ENST00000492851 S100A10P60903 97 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 PDE6HQ13956 83 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 S100ZQ8WXG8 99 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 SEC22CQ9BRL7 303 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 C11orf1Q9H5F2 150 aa8.74□□□□□ -1.01
COL6A1-205ENST00000492851 DNAH2Q9P225 4427 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 PRAC2D3DTV9 90 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 H3BNG1 76 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 SLC17A3O00476 420 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
COL6A1-205ENST00000492851 M6PRP20645 277 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 IL15RAQ13261 267 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 OR5I1Q13606 314 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 RAB32Q13637 225 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 MORN5Q5VZ52 161 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 LINC00612Q8N6U2 182 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 ZNRF2Q8NHG8 242 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 GNPNAT1Q96EK6 184 aaPredicted RBP8.73□□□□□ -1.01
COL6A1-205ENST00000492851 SLC25A31Q9H0C2 315 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 AAMDCQ9H7C9 122 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 GPN1Q9HCN4 374 aaPredicted RBP8.73□□□□□ -1.01
COL6A1-205ENST00000492851 ZNF586Q9NXT0 402 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 TIMM9Q9Y5J7 89 aa8.73□□□□□ -1.01
COL6A1-205ENST00000492851 TRAV5A0A0B4J249 113 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 UBE2L5PA0A1B0GUS4 154 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 H3BTX0 84 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 CT45A10P0DMU9 189 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 FGF7P21781 194 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 DAZ2Q13117 558 aaKnown RBP8.72□□□□□ -1.01
COL6A1-205ENST00000492851 ZNF680Q8NEM1 530 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 KCNIP2Q9NS61 270 aa8.72□□□□□ -1.01
COL6A1-205ENST00000492851 TRAV12-3A0A0B4J271 114 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 NMBP08949 121 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
COL6A1-205ENST00000492851 SSX7Q7RTT5 188 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 RXFP4Q8TDU9 374 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 LINC00467Q9BRT7 94 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 FAT2Q9NYQ8 4349 aa8.71□□□□□ -1.02
COL6A1-205ENST00000492851 DNAH17Q9UFH2 4485 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 TRAV26-1A0A087WT03 109 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 IGSF23A1L1A6 192 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 GAGE12BA1L429 117 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 E5RGE8 158 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 GAGE7O76087 117 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 GAGE12FP0CL80 117 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 BTF3P20290 206 aaKnown RBP8.7□□□□□ -1.02
COL6A1-205ENST00000492851 ASAH1Q13510 395 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 KIR3DS1Q14943 382 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 TTC32Q5I0X7 151 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 C18orf15Q96N68 181 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 NPCDR1Q9BY65 106 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 NMES1Q9C002 83 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 Q9H8V8 135 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 HERC2O95714 4834 aa8.7□□□□□ -1.02
COL6A1-205ENST00000492851 C7orf71A4D174 169 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 J3KRW8 73 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 ANXA2RQ3ZCQ2 193 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 TMEM78Q5T7P6 136 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 C9orf47Q6ZRZ4 202 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 EIF4E3Q8N5X7 224 aaKnown RBP8.69□□□□□ -1.02
COL6A1-205ENST00000492851 OR5C1Q8NGR4 320 aa8.69□□□□□ -1.02
COL6A1-205ENST00000492851 ENKURQ8TC29 256 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms