RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 C16orf74Q96GX8 76 aa12.93□□□□□ -0.34
CHD1L-209ENST00000492728 LYRM2Q9NU23 88 aaPredicted RBP12.93□□□□□ -0.34
CHD1L-209ENST00000492728 UQCC1Q9NVA1 299 aa12.93□□□□□ -0.34
CHD1L-209ENST00000492728 F5H768 121 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 TMEM252Q8N6L7 170 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 CCDC32Q9BV29 185 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 DNAJC4Q9NNZ3 241 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
CHD1L-209ENST00000492728 ZNF586Q9NXT0 402 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 RNF24Q9Y225 148 aa12.92□□□□□ -0.34
CHD1L-209ENST00000492728 CT45A10P0DMU9 189 aa12.91□□□□□ -0.34
CHD1L-209ENST00000492728 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
CHD1L-209ENST00000492728 PXMP4Q9Y6I8 212 aa12.91□□□□□ -0.34
CHD1L-209ENST00000492728 H7BYZ3 331 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 J3KRW8 73 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 ATP5G1P05496 136 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 ATP5G3P48201 142 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 SULT1A1P50225 295 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 LINC00612Q8N6U2 182 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 OR10J6PQ8NGY7 276 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 RNF141Q8WVD5 230 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 SLC39A9Q9NUM3 307 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 NDUFA13Q9P0J0 144 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 TIMM8BQ9Y5J9 83 aaPredicted RBP12.9□□□□□ -0.34
CHD1L-209ENST00000492728 ABCA13Q86UQ4 5058 aa12.9□□□□□ -0.34
CHD1L-209ENST00000492728 LRP1BQ9NZR2 4599 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 CBY3A6NI87 242 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 M0R3E3 92 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 NUDT3O95989 172 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 RPL29P47914 159 aaKnown RBP12.89□□□□□ -0.35
CHD1L-209ENST00000492728 BAXQ07812 192 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 GCSAMLQ5JQS6 135 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 Q6ZRG5 221 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 OR1L4Q8NGR5 311 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 ZNRF2Q8NHG8 242 aa12.89□□□□□ -0.35
CHD1L-209ENST00000492728 FAM240BA0A1B0GVZ2 78 aa12.88□□□□□ -0.35
CHD1L-209ENST00000492728 NDUFB4O95168 129 aa12.88□□□□□ -0.35
CHD1L-209ENST00000492728 RAB31Q13636 194 aa12.88□□□□□ -0.35
CHD1L-209ENST00000492728 ZNF493Q6ZR52 646 aa12.88□□□□□ -0.35
CHD1L-209ENST00000492728 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
CHD1L-209ENST00000492728 TRBV19A0A075B6N1 114 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 PYYP10082 97 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
CHD1L-209ENST00000492728 FGF7P21781 194 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 S100A11P31949 105 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 ERCC8Q13216 396 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 ASAH1Q13510 395 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 ZNF575Q86XF7 245 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 CHAC2Q8WUX2 184 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 PFDN5Q99471 154 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 ATG101Q9BSB4 218 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 LINC00588Q9Y4M8 146 aa12.87□□□□□ -0.35
CHD1L-209ENST00000492728 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 SIX6O95475 246 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 FAM3BP58499 235 aaPredicted RBP12.86□□□□□ -0.35
CHD1L-209ENST00000492728 GUK1Q16774 197 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 C1orf134Q5TEV5 83 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 STX12Q86Y82 276 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 ODF3Q96PU9 254 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 GPN1Q9HCN4 374 aaPredicted RBP12.86□□□□□ -0.35
CHD1L-209ENST00000492728 BATF3Q9NR55 127 aa12.86□□□□□ -0.35
CHD1L-209ENST00000492728 HSPG2P98160 4391 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 ZNF253O75346 499 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 HOXA5P20719 270 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 IFITM3Q01628 133 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 NHLH2Q02577 135 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 THAP6Q8TBB0 222 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 NPCDR1Q9BY65 106 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 TMEM14CQ9P0S9 112 aa12.85□□□□□ -0.35
CHD1L-209ENST00000492728 NBDYA0A0U1RRE5 68 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 MED14OSP0DP75 135 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 LEPP41159 167 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 HBG1P69891 147 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 HBG2P69892 147 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 FAM19A4Q96LR4 140 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 SLC25A2Q9BXI2 301 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 OR5AC2Q9NZP5 309 aa12.84□□□□□ -0.35
CHD1L-209ENST00000492728 TRAV26-1A0A087WT03 109 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 GAGE12BA1L429 117 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 H0YIZ8 118 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 GAGE7O76087 117 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 GAGE12FP0CL80 117 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 GAGE12GP0CL81 117 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 GAGE12IP0CL82 117 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 TNP2Q05952 138 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 MZT2BQ6NZ67 158 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 EXOC3-AS1Q8N2X6 119 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
CHD1L-209ENST00000492728 FAM167A-AS1Q96KT0 104 aa12.83□□□□□ -0.36
CHD1L-209ENST00000492728 A0A0J9YY99 117 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 HIST1H1EP10412 219 aaKnown RBP12.82□□□□□ -0.36
CHD1L-209ENST00000492728 CD300CQ08708 224 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 ATP6V1FQ16864 119 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 SOHLH1Q5JUK2 328 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 Q6ZTI0 123 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 MIR17HGQ75NE6 70 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
CHD1L-209ENST00000492728 C11orf72Q8NBR9 251 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms