RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 HERC1Q15751 4861 aa8.39□□□□□ -1.07
MDC1-207ENST00000492462 E5RGE8 158 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 AMBPP02760 352 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 CHAC2Q8WUX2 184 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 PPP1R1CQ8WVI7 109 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 PFDN5Q99471 154 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 NIPSNAP3BQ9BS92 247 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 BATF3Q9NR55 127 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 RNF24Q9Y225 148 aa8.38□□□□□ -1.07
MDC1-207ENST00000492462 DNAH2Q9P225 4427 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 PLAC8L1A1L4L8 177 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 SSNA1O43805 119 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 NDUFB4O95168 129 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 RLN2P04090 185 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 PYYP10082 97 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 HTN3P15516 51 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 DEFA1P59665 94 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 DEFA3P59666 94 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 PPP1R14DQ9NXH3 145 aa8.37□□□□□ -1.07
MDC1-207ENST00000492462 M0R3E3 92 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 MPC2O95563 127 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 CYCSP99999 105 aaKnown RBP8.36□□□□□ -1.07
MDC1-207ENST00000492462 FCN2Q15485 313 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 MIR17HGQ75NE6 70 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 FAM167A-AS1Q96KT0 104 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 LINC01587Q99440 93 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 SLC25A31Q9H0C2 315 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
MDC1-207ENST00000492462 TRBV19A0A075B6N1 114 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 J3KRW8 73 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 MPDU1O75352 247 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 CT45A10P0DMU9 189 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 HTN1P15515 57 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 CDKN1BP46527 198 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 SLC25A2Q9BXI2 301 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 SMIM3Q9BZL3 60 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
MDC1-207ENST00000492462 TMEM14CQ9P0S9 112 aa8.35□□□□□ -1.07
MDC1-207ENST00000492462 NPIPB6E9PJ23 425 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 HIST1H1EP10412 219 aaKnown RBP8.34□□□□□ -1.07
MDC1-207ENST00000492462 TSPOP30536 169 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 DAD1P61803 113 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 OXA1LQ15070 435 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 GUK1Q16774 197 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 GFI1BQ5VTD9 330 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 EXOC3-AS1Q8N2X6 119 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 OR10J6PQ8NGY7 276 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 BLNKQ8WV28 456 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 NDUFAF3Q9BU61 184 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 MBD2Q9UBB5 411 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 HSPB11Q9Y547 144 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 ALG5Q9Y673 324 aa8.34□□□□□ -1.07
MDC1-207ENST00000492462 TEX48A0A1B0GUV7 120 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 ZNF253O75346 499 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 EIF3GO75821 320 aaKnown RBP eCLIP8.33□□□□□ -1.08
MDC1-207ENST00000492462 DEFB130BP0DP73 79 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 DEFB130AP0DP74 79 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 TAS2R60P59551 318 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 ERCC8Q13216 396 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 ATP5SQ99766 215 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 WFDC1Q9HC57 220 aa8.33□□□□□ -1.08
MDC1-207ENST00000492462 FAT2Q9NYQ8 4349 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 LYRM9A8MSI8 78 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 OR10J4P0C629 311 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 RPL12P30050 165 aaKnown RBP8.32□□□□□ -1.08
MDC1-207ENST00000492462 ICAM4Q14773 271 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 TMEM88Q6PEY1 159 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 FXYD5Q96DB9 178 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 ZNF503Q96F45 646 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 MUC4Q99102 2169 aa8.32□□□□□ -1.08
MDC1-207ENST00000492462 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
MDC1-207ENST00000492462 TRAV12-3A0A0B4J271 114 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 H7BYZ3 331 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
MDC1-207ENST00000492462 NBEAP1P0C6P0 100 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 POM121L12Q8N7R1 296 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 RNASE8Q8TDE3 154 aaKnown RBP8.31□□□□□ -1.08
MDC1-207ENST00000492462 MRPL53Q96EL3 112 aaKnown RBP8.31□□□□□ -1.08
MDC1-207ENST00000492462 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 AGPAT4-IT1Q9H0P7 198 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 FUT9Q9Y231 359 aa8.31□□□□□ -1.08
MDC1-207ENST00000492462 P0DMU3 169 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 FAM231AP0DMU4 169 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 FAM231CP0DMU5 169 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 PDE6HQ13956 83 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 FFAR4Q5NUL3 377 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 FAM122CQ6P4D5 195 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 VGLL1Q99990 258 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 PAXXQ9BUH6 204 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 MRPL32Q9BYC8 188 aaKnown RBP8.3□□□□□ -1.08
MDC1-207ENST00000492462 OR51M1Q9H341 326 aa8.3□□□□□ -1.08
MDC1-207ENST00000492462 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
MDC1-207ENST00000492462 C17orf112F2Z3M2 114 aa8.29□□□□□ -1.08
MDC1-207ENST00000492462 PET100P0DJ07 73 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms