RNA–Protein interactions for RNA: ENST00000492357.1

USP54-214, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 3

Gene USP54, Length 353 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-214ENST00000492357 A6NJY4 79 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 B4DEV8 164 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 F8W036 122 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 K7EQG2 157 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 PEX7O00628 323 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 WIPF1O43516 503 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 IGLV1-51P01701 117 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 PSG3Q16557 428 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 TMEM183BQ1AE95 376 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 DEFB114Q30KQ6 69 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 NSUN5P1Q3KNT7 163 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 RBPMS2Q6ZRY4 209 aaKnown RBP7.29□□□□□ -1.24
USP54-214ENST00000492357 SVBPQ8N300 66 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 DCANP1Q8TF63 244 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 C16orf92Q96LL3 132 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 C17orf77Q96MU5 243 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 SMIM7Q9BQ49 75 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 ZMAT5Q9UDW3 170 aaKnown RBP7.29□□□□□ -1.24
USP54-214ENST00000492357 NAT8Q9UHE5 227 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 ZFP30Q9Y2G7 519 aa7.29□□□□□ -1.24
USP54-214ENST00000492357 SETD2Q9BYW2 2564 aaPredicted RBP7.28□□□□□ -1.24
USP54-214ENST00000492357 TEP1Q99973 2627 aaKnown RBP7.28□□□□□ -1.24
USP54-214ENST00000492357 ZNF727A8MUV8 499 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 DIRC3C9JPN6 131 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 SLC17A3O00476 420 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
USP54-214ENST00000492357 AKR1C3P42330 323 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 UBE2G1P62253 170 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 SRSF3P84103 164 aaKnown RBP7.28□□□□□ -1.24
USP54-214ENST00000492357 SRSF2Q01130 221 aaKnown RBP7.28□□□□□ -1.24
USP54-214ENST00000492357 C9orf66Q5T8R8 295 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 LCN12Q6JVE5 192 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 ADAMTSL5Q6ZMM2 481 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 COX8CQ7Z4L0 72 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 MS4A6AQ9H2W1 248 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 PARLQ9H300 379 aa7.28□□□□□ -1.24
USP54-214ENST00000492357 ATRQ13535 2644 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 IGHV3OR16-13A0A075B7E8 117 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 IGHV3-49A0A0A0MS15 119 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 IGHV3-74A0A0B4J1X5 117 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 DNASE2O00115 360 aaPredicted RBP7.27□□□□□ -1.25
USP54-214ENST00000492357 SNAPINO95295 136 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 RIPPLY3P57055 190 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
USP54-214ENST00000492357 TMEM241Q24JQ0 296 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 TVP23CQ96ET8 276 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 CLUHP3Q96NS8 147 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 ODF3Q96PU9 254 aa7.27□□□□□ -1.25
USP54-214ENST00000492357 TRAV8-2A0A0B4J237 113 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 IGHV3-66A0A0C4DH42 116 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 SCO2A0A1W2PP80 73 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 C9JQL5 133 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 LCE2BO14633 110 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 SAP30O75446 220 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 RPL35P42766 123 aaKnown RBP7.26□□□□□ -1.25
USP54-214ENST00000492357 GNG4P50150 75 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 RHEBQ15382 184 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 TMEM61Q8N0U2 210 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 EXOC3-AS1Q8N2X6 119 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 DUX3Q96PT4 197 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 NDFIP1Q9BT67 221 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 SDF2L1Q9HCN8 221 aa7.26□□□□□ -1.25
USP54-214ENST00000492357 NPIPB6E9PJ23 425 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 DUSP14O95147 198 aaKnown RBP7.25□□□□□ -1.25
USP54-214ENST00000492357 LTAP01374 205 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 ADCYAP1P18509 176 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 FLI1Q01543 452 aaPredicted RBP7.25□□□□□ -1.25
USP54-214ENST00000492357 KRTAP21-3Q3LHN1 58 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 TMEM78Q5T7P6 136 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 FOXI2Q6ZQN5 318 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 OR10J6PQ8NGY7 276 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 IGF2BP2-AS1Q96M15 143 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 LINC00052Q96N35 136 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 TMEM242Q9NWH2 141 aa7.25□□□□□ -1.25
USP54-214ENST00000492357 A0A087WWC5 75 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 A8MTW9 85 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 M0R3E3 92 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 PPP1R2P9O14990 202 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 APOC3P02656 99 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 CD300EQ496F6 205 aaPredicted RBP7.24□□□□□ -1.25
USP54-214ENST00000492357 GOLT1AQ6ZVE7 132 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 FAM231DQ6ZW35 169 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 TMEM183AQ8IXX5 376 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 CTDSP1Q9GZU7 261 aa7.24□□□□□ -1.25
USP54-214ENST00000492357 TRBV20OR9-2A0A075B6H5 130 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 H3BTX0 84 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 IGLV2-11P01706 119 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 CD33P20138 364 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 ZNF138P52744 262 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 BEAN1Q3B7T3 259 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 CENPWQ5EE01 88 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 EBLN2Q6P2I7 272 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 Q86TA4 180 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 LINC01551Q86U37 167 aa7.23□□□□□ -1.25
USP54-214ENST00000492357 BAGE2Q86Y30 109 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms