RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 NRGNQ92686 78 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 ZNF492Q9P255 531 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 SMAD5-AS1Q9Y6J3 95 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 NBPF19A0A087WUL8 3843 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 FAM181BA6NEQ2 426 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 APOHP02749 345 aaPredicted RBP9.69□□□□□ -0.86
HMGN1-220ENST00000492280 CLEC3BP05452 202 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 G0S2P27469 103 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 COX19Q49B96 90 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 CLEC19AQ6UXS0 136 aa9.69□□□□□ -0.86
HMGN1-220ENST00000492280 SORL1Q92673 2214 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 SRSF8Q9BRL6 282 aaKnown RBP9.68□□□□□ -0.86
HMGN1-220ENST00000492280 TRAV40A0A0B4J280 105 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 TMEM213A2RRL7 107 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 PRAC2D3DTV9 90 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 NPIPB6E9PJ23 425 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 FXYD7P58549 80 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 ERCC8Q13216 396 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 AAMDCQ9H7C9 122 aa9.68□□□□□ -0.86
HMGN1-220ENST00000492280 SONP18583 2426 aaKnown RBP9.67□□□□□ -0.86
HMGN1-220ENST00000492280 ZNF80P51504 273 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-220ENST00000492280 LY6EQ16553 131 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 ATP5L2Q7Z4Y8 100 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 ZNF469Q96JG9 3925 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-220ENST00000492280 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 FAM106CPP0CH98 169 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 SFTPCP11686 197 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 TFPI2P48307 235 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 LCNL1Q6ZST4 164 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 C2orf88Q9BSF0 95 aa9.67□□□□□ -0.86
HMGN1-220ENST00000492280 SETD2Q9BYW2 2564 aaPredicted RBP9.67□□□□□ -0.86
HMGN1-220ENST00000492280 IGHV1-24A0A0C4DH33 117 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 UBE2E1P51965 193 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 MINOS1Q5TGZ0 78 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 RASL11AQ6T310 242 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 LOC102724200A0A096LPH7 203 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-220ENST00000492280 SH2D1AO60880 128 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 IGHG4P01861 327 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 RELQ04864 619 aaPredicted RBP9.66□□□□□ -0.86
HMGN1-220ENST00000492280 EBI3Q14213 229 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 THYN1Q9P016 225 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 RABAC1Q9UI14 185 aa9.66□□□□□ -0.86
HMGN1-220ENST00000492280 NAV2Q8IVL1 2488 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 SERTM2A0A1B0GWG4 89 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 K7EQM0 130 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 M0R143 59 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 NPFFO15130 113 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 PPIFP30405 207 aaKnown RBP9.65□□□□□ -0.86
HMGN1-220ENST00000492280 FAM106AQ4KMX7 169 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 CT83Q5H943 113 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 Q6ZQT7 251 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 C20orf144Q9BQM9 153 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 MIEN1Q9BRT3 115 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 TEX15Q9BXT5 2789 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 TRAV30A0A087WSZ9 112 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 LOC389332A0A1B0GUA5 103 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 A0A1B0GUT8 65 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 C2orf70A6NJV1 201 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 SMKR1H3BMG3 65 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 RAB4AP20338 218 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 KLF5Q13887 457 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-220ENST00000492280 C1orf122Q6ZSJ8 110 aa9.65□□□□□ -0.86
HMGN1-220ENST00000492280 IGHV4-38-2P0DP08 117 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 CTRLP40313 264 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 DEFB1P60022 68 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 LYZL1Q6UWQ5 148 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 CCDC168Q8NDH2 2452 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 TCTAP57738 103 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-220ENST00000492280 AMN1Q8IY45 258 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 ZNF502Q8TBZ5 544 aa9.64□□□□□ -0.87
HMGN1-220ENST00000492280 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.63□□□□□ -0.87
HMGN1-220ENST00000492280 TRBV12-3P01733 135 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 CSN1S1P47710 185 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
HMGN1-220ENST00000492280 OR4B1Q8NGF8 309 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 TXN2Q99757 166 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 J3KRW8 73 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 NCR2O95944 276 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 RPL7P18124 248 aaKnown RBP9.63□□□□□ -0.87
HMGN1-220ENST00000492280 FAM110DQ8TAY7 271 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-220ENST00000492280 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 ZFP30Q9Y2G7 519 aa9.63□□□□□ -0.87
HMGN1-220ENST00000492280 C16orf54Q6UWD8 224 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 Q6ZN92 141 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 Q6ZVH6 145 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 PRR25Q96S07 402 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 GFRA4Q9GZZ7 299 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 IGKV3-7A0A075B6H7 116 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 CLPSL1A2RUU4 121 aa9.62□□□□□ -0.87
HMGN1-220ENST00000492280 TMEM189A5PLL7 270 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms