RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 CAMLGP49069 296 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 SULT1A1P50225 295 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 RHOBP62745 196 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 RAB31Q13636 194 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 C1orf134Q5TEV5 83 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 MIC13Q5XKP0 118 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 NRARPQ7Z6K4 114 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 C12orf45Q8N5I9 185 aaPredicted RBP5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 TMEM252Q8N6L7 170 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 LRRC20Q8TCA0 184 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 MRPL53Q96EL3 112 aaKnown RBP5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF503Q96F45 646 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 FAM19A4Q96LR4 140 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 SEC22CQ9BRL7 303 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 NUDT15Q9NV35 164 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 UQCC1Q9NVA1 299 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 ZNF586Q9NXT0 402 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 TMEM14CQ9P0S9 112 aa5.85□□□□□ -1.47
SMARCB1-207ENST00000491967 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 TRBV19A0A075B6N1 114 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 TRAV6A0A075B6T7 132 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 TRAV5A0A0B4J249 113 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 L7N2F9 121 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 UPK1BO75841 260 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 CST7O76096 145 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 NDUFB4O95168 129 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 CT45A10P0DMU9 189 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 VAMP2P63027 116 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 DAZ2Q13117 558 aaKnown RBP5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 ASAH1Q13510 395 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 Q6ZRG5 221 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 UBE2DNLQ8IWF7 75 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 OR1L4Q8NGR5 311 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 C18orf15Q96N68 181 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 PFDN5Q99471 154 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 SLC39A9Q9NUM3 307 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 LINC00588Q9Y4M8 146 aa5.84□□□□□ -1.47
SMARCB1-207ENST00000491967 NBDYA0A0U1RRE5 68 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 IGSF23A1L1A6 192 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 C5orf51A6NDU8 294 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 KLLNB2CW77 178 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 F5H768 121 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 MPDU1O75352 247 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 NMBP08949 121 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 H2AFB2P0C5Z0 115 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 CAV2P51636 162 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 IFITM3Q01628 133 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 RAB32Q13637 225 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 PDE6HQ13956 83 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 ATP6V1FQ16864 119 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 SOHLH1Q5JUK2 328 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 OR10J6PQ8NGY7 276 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 RNF141Q8WVD5 230 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 NOP10Q9NPE3 64 aaKnown RBP5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 PPP1R14DQ9NXH3 145 aa5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 LSM5Q9Y4Y9 91 aaKnown RBP5.83□□□□□ -1.48
SMARCB1-207ENST00000491967 FAM25EA8MYX2 175 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 H3BTX0 84 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 SNRPCP09234 159 aaKnown RBP5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 PRB4P10163 310 aaPredicted RBP5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 HIST1H1EP10412 219 aaKnown RBP5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 PVALBP20472 110 aaPredicted RBP5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 LEPP41159 167 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 BCAP31P51572 246 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 HBG1P69891 147 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 HBG2P69892 147 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 C9orf47Q6ZRZ4 202 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 C11orf72Q8NBR9 251 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 RXFP4Q8TDU9 374 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 FAM167A-AS1Q96KT0 104 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 PYGO2Q9BRQ0 406 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 UPK3BQ9BT76 320 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 PARD6GQ9BYG4 376 aaPredicted RBP5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 PRELID1Q9Y255 219 aa5.82□□□□□ -1.48
SMARCB1-207ENST00000491967 FAM240BA0A1B0GVZ2 78 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 SLC25A5P05141 298 aaKnown RBP5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 HTN1P15515 57 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 CRISP2P16562 243 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 BTF3P20290 206 aaKnown RBP5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 M6PRP20645 277 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 HOXA5P20719 270 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 CCL18P55774 89 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 TNP2Q05952 138 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 ANXA2RQ3ZCQ2 193 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 NPCDR1Q9BY65 106 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 AGPAT4-IT1Q9H0P7 198 aa5.81□□□□□ -1.48
SMARCB1-207ENST00000491967 TRAV26-1A0A087WT03 109 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 TRBV7-9A0A0J9YWB2 115 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 UBE2L5PA0A1B0GUS4 154 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 A0A1W2PPQ1 181 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 C7orf71A4D174 169 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 H0YIZ8 118 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 M0R3E3 92 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 NUDT3O95989 172 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 FGF7P21781 194 aa5.8□□□□□ -1.48
SMARCB1-207ENST00000491967 DEFA1P59665 94 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms