RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 OR10J4P0C629 311 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 NBEAP1P0C6P0 100 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 PSG9Q00887 426 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 PSG3Q16557 428 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 ACTL10Q5JWF8 245 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 RNF141Q8WVD5 230 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 MRPL53Q96EL3 112 aaKnown RBP11□□□□□ -0.65
CDC42SE1-205ENST00000491825 CLUHP3Q96NS8 147 aa11□□□□□ -0.65
CDC42SE1-205ENST00000491825 A0A0J9YX75 114 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 CTXND1A0A1B0GTU2 59 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 KNCNA6PVL3 124 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 H3BMM0 161 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 H3BTX0 84 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 ARL14EPLP0DKL9 152 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 EIF5AL1Q6IS14 154 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 DPPA3Q6W0C5 159 aa10.99□□□□□ -0.65
CDC42SE1-205ENST00000491825 FRAS1Q86XX4 4008 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 A8MTW9 85 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 UBE2CO00762 179 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 IGFL4Q6B9Z1 124 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 EBLN2Q6P2I7 272 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 SSX7Q7RTT5 188 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 LYPD1Q8N2G4 141 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 ZNF738Q8NE65 137 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 TP53TG1Q9Y2A0 90 aa10.98□□□□□ -0.65
CDC42SE1-205ENST00000491825 EIF3GO75821 320 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 CXorf1O96002 111 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 RPL35AP18077 110 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 HLA-DMBP28068 263 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 MORN3Q6PF18 240 aaPredicted RBP10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 Q6ZWC4 215 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 BLNKQ8WV28 456 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 TMED6Q8WW62 240 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 LINC00476Q8WZB0 136 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 RPUSD4Q96CM3 377 aaKnown RBP10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 PHYHIPLQ96FC7 376 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 AAMDCQ9H7C9 122 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 PRELID1Q9Y255 219 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 AGRNO00468 2067 aa10.97□□□□□ -0.65
CDC42SE1-205ENST00000491825 F6UB75 175 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 HMGB3O15347 200 aaKnown RBP10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 RAB5CP51148 216 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 NKX2-5P52952 324 aaPredicted RBP10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 DEFB1P60022 68 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 CSTL1Q9H114 145 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 TMEM167BQ9NRX6 74 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CDC42SE1-205ENST00000491825 A0A0J9YWU9 116 aa10.95□□□□□ -0.66
CDC42SE1-205ENST00000491825 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-205ENST00000491825 GCHFRP30047 84 aa10.95□□□□□ -0.66
CDC42SE1-205ENST00000491825 NUTF2P61970 127 aaKnown RBP10.95□□□□□ -0.66
CDC42SE1-205ENST00000491825 DEFB135Q30KP9 77 aa10.95□□□□□ -0.66
CDC42SE1-205ENST00000491825 MAP1LC3B2A6NCE7 125 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 M0R3E3 92 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 SPRY2O43597 315 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 CA1P00915 261 aaPredicted RBP10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 CNN1P51911 297 aaKnown RBP10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 ICAM4Q14773 271 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 EXOC3-AS1Q8N2X6 119 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 MAP1LC3BQ9GZQ8 125 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 Q9H3A6 140 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
CDC42SE1-205ENST00000491825 ZNF705FA8MVS1 300 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 GIG44P09565 113 aaPredicted RBP10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 FHITP49789 147 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 SULT1A2P50226 295 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 RANP62826 216 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 PMS2P11Q13670 270 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 AMTNQ6UX39 209 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 ARL6IP6Q8N6S5 226 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 RNF183Q96D59 192 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 C1QTNF4Q9BXJ3 329 aa10.93□□□□□ -0.66
CDC42SE1-205ENST00000491825 CXorf65A6NEN9 183 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 NUPR2A6NF83 97 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 PRAC2D3DTV9 90 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 NPIPB6E9PJ23 425 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 HIST1H1AQ02539 215 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 FAM74A1Q5RGS3 127 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 OR4B1Q8NGF8 309 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 OR10J6PQ8NGY7 276 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 RXFP4Q8TDU9 374 aa10.92□□□□□ -0.66
CDC42SE1-205ENST00000491825 DNAH10Q8IVF4 4471 aa10.91□□□□□ -0.66
CDC42SE1-205ENST00000491825 ODF3Q96PU9 254 aa10.91□□□□□ -0.66
CDC42SE1-205ENST00000491825 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
CDC42SE1-205ENST00000491825 A0A1W2PRE2 83 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 RBAKDNA6NC62 111 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 IGKV3-20P01619 116 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 AMBPP02760 352 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 ZNF705DP0CH99 300 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 ZNF705BP0CI00 300 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 CSN1S1P47710 185 aa10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 FGF8P55075 233 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-205ENST00000491825 CEMP1Q6PRD7 247 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms