RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZNF688P0C7X2 276 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 NUTF2P61970 127 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 GCSAMLQ5JQS6 135 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 PSMG4Q5JS54 123 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 CLLU1Q5K131 121 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 FAM74A1Q5RGS3 127 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 FAM122CQ6P4D5 195 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 MIR17HGQ75NE6 70 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 APRG1Q8IVJ8 170 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 LYPD6BQ8NI32 183 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 SUN5Q8TC36 379 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 TMED6Q8WW62 240 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 MBD3L1Q8WWY6 194 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 SMDT1Q9H4I9 107 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 PRELID1Q9Y255 219 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 ARL2-SNX15V9GYD0 113 aa8.1□□□□□ -1.11
TMEM39A-211ENST00000491685 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 ZNF253O75346 499 aa8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 CDC34P49427 236 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 IFITM2Q01629 132 aa8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 TXNDC17Q9BRA2 123 aa8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 MAP6D1Q9H9H5 199 aa8.09□□□□□ -1.11
TMEM39A-211ENST00000491685 RYR1P21817 5038 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 DUSP14O95147 198 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 LY6G6CO95867 125 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 CXorf1O96002 111 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 CSN1S1P47710 185 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 PDE6HQ13956 83 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 LYPD1Q8N2G4 141 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 BLNKQ8WV28 456 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 RNF183Q96D59 192 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 SLC25A2Q9BXI2 301 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 NKX6-2Q9C056 277 aaPredicted RBP8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 SH3BGRL3Q9H299 93 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
TMEM39A-211ENST00000491685 TRBV19A0A075B6N1 114 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 MRPS12O15235 138 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 IGLC2P0DOY2 106 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 PSG3Q16557 428 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 ACTL10Q5JWF8 245 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 MORN5Q5VZ52 161 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 MORN3Q6PF18 240 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 FOXI2Q6ZQN5 318 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 RPP25LQ8N5L8 163 aaKnown RBP8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 ZNF738Q8NE65 137 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 RAB24Q969Q5 203 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 TCEAL7Q9BRU2 100 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 CSTL1Q9H114 145 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 ZNF331Q9NQX6 463 aaPredicted RBP8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 TMEM167BQ9NRX6 74 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 HECTD4Q9Y4D8 3996 aa8.07□□□□□ -1.12
TMEM39A-211ENST00000491685 H3BQ15 152 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 SOCS3O14543 225 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 H2AFB1P0C5Y9 115 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 OR10J4P0C629 311 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 STAG3L2P0CL84 134 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 STAG3L3P0CL85 134 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 PYYP10082 97 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 RANP62826 216 aaKnown RBP8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 CEMP1Q6PRD7 247 aaPredicted RBP8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 ARL6IP6Q8N6S5 226 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 OR4B1Q8NGF8 309 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 FAM167A-AS1Q96KT0 104 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 C17orf77Q96MU5 243 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 ZNF586Q9NXT0 402 aa8.06□□□□□ -1.12
TMEM39A-211ENST00000491685 KMT2AQ03164 3969 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 NMBP08949 121 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 SNRPCP09234 159 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 UBE2L3P68036 154 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 IQCF2Q8IXL9 164 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 FAM24BQ8N5W8 94 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 EIF4E3Q8N5X7 224 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 MRPL53Q96EL3 112 aaKnown RBP8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 C1QTNF4Q9BXJ3 329 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 SAV1Q9H4B6 383 aaPredicted RBP8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 DNAH10Q8IVF4 4471 aa8.05□□□□□ -1.12
TMEM39A-211ENST00000491685 AGRNO00468 2067 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 RAB19A4D1S5 217 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 PGPA6NDG6 321 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 KNCNA6PVL3 124 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 H3BMM0 161 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 HMGB3O15347 200 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 IFNA1P01562 189 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 TCTAP57738 103 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 IGFL4Q6B9Z1 124 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 UQCC3Q6UW78 93 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 FAM213BQ8TBF2 198 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 RPUSD4Q96CM3 377 aaKnown RBP8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 FXYD5Q96DB9 178 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 CLUHP3Q96NS8 147 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 RARRES2Q99969 163 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 MANBALQ9NQG1 85 aa8.04□□□□□ -1.12
TMEM39A-211ENST00000491685 VPS13DQ5THJ4 4388 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms