RNA–Protein interactions for RNA: ENST00000491467.1

SRGAP3-210, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-210ENST00000491467 NUDT10Q8NFP7 164 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 TSKUQ8WUA8 353 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 DAZAP1Q96EP5 407 aaKnown RBP9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 NUDT11Q96G61 164 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 LINC00479Q96M42 142 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 PRSS22Q9GZN4 317 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 GFRA4Q9GZZ7 299 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 RNASE7Q9H1E1 156 aaKnown RBP9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 SERTAD4Q9NUC0 356 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 SOX21Q9Y651 276 aaPredicted RBP9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 TENM3Q9P273 2699 aa9.26□□□□□ -0.93
SRGAP3-210ENST00000491467 TRAV34A0A0B4J273 112 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 HLA-DQA1P01909 254 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 ADMP35318 185 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 GNG5P63218 68 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 ATP5L2Q7Z4Y8 100 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 ZNF418Q8TF45 676 aaPredicted RBP9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 ZNF331Q9NQX6 463 aaPredicted RBP9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 CLEC5AQ9NY25 188 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 NAT8BQ9UHF3 227 aa9.25□□□□□ -0.93
SRGAP3-210ENST00000491467 A0A087X0K7 114 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 AMY1AP04745 511 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 CLEC3BP05452 202 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 IGHV4-38-2P0DP08 117 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 PSG3Q16557 428 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 BRD3OSQ6XYD6 125 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 RYR1P21817 5038 aa9.24□□□□□ -0.93
SRGAP3-210ENST00000491467 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 Q0VG73 95 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 TOMM20LQ6UXN7 152 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 Q86TA4 180 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 GPR61Q9BZJ8 451 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 RPP21Q9H633 154 aaKnown RBP9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 ZFAND3Q9H8U3 227 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 RPH3ALQ9UNE2 315 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 S4R3C0 116 aa9.23□□□□□ -0.93
SRGAP3-210ENST00000491467 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 G3V318 75 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 H3BUX3 64 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 IGLV2-11P01706 119 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 P01737 135 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 GPR183P32249 361 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 IER3P46695 156 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 SAPCD1Q5SSQ6 148 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 GOLT1AQ6ZVE7 132 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 COX8CQ7Z4L0 72 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 TMEM219Q86XT9 240 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 OR5R1Q8NH85 324 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 CCDC140Q96MF4 163 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 METTL26Q96S19 204 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 SLC50A1Q9BRV3 221 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 PSG8Q9UQ74 426 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 U3KQE9 123 aa9.22□□□□□ -0.93
SRGAP3-210ENST00000491467 IGHV3OR16-10A0A075B7F0 116 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 LINC01548A6NM66 108 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 IFITM10A6NMD0 228 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 BUB3O43684 328 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 IGHV3-23P01764 117 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 TRGV3P03979 118 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 ESDP10768 282 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 CRISP2P16562 243 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 PPIFP30405 207 aaKnown RBP9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 FOXA3P55318 350 aaPredicted RBP9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 PAFAH1B2P68402 229 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 OR10J3Q5JRS4 329 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 CLEC19AQ6UXS0 136 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 C9orf139Q6ZV77 190 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 TEX29Q8N6K0 151 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 PACRGQ96M98 296 aaPredicted RBP9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 C17orf77Q96MU5 243 aa9.21□□□□□ -0.94
SRGAP3-210ENST00000491467 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 NDUFA4O00483 81 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 C9orf152Q5JTZ5 239 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 PRR27Q6MZM9 219 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 C16orf54Q6UWD8 224 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 PRNTQ86SH4 94 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 NHLRC2Q8NBF2 726 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 NUP35Q8NFH5 326 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 OR10D4PQ8NGN7 298 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
SRGAP3-210ENST00000491467 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 A0A1B0GW15 77 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 ZNF785A8K8V0 405 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 H3BTX0 84 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 FABP4P15090 132 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 CBLN1P23435 193 aa9.19□□□□□ -0.94
SRGAP3-210ENST00000491467 FAM162BQ5T6X4 162 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms