RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ZNF705GA8MUZ8 300 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 H0YIZ8 118 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 H7BYZ3 331 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 NHLH2Q02577 135 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 PDE6HQ13956 83 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 PARD6GQ9BYG4 376 aaPredicted RBP11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 TMEM14CQ9P0S9 112 aa11.83□□□□□ -0.52
PDLIM2-217ENST00000491330 TRAV12-2A0A075B6T6 113 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 IGLC2P0DOY2 106 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 DEFB130BP0DP73 79 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 DEFB130AP0DP74 79 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 LEPP41159 167 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 BAP18Q8IXM2 172 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 THAP6Q8TBB0 222 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 ATP5SQ99766 215 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 WDR61Q9GZS3 305 aaKnown RBP11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 HSPB11Q9Y547 144 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 TIMM9Q9Y5J7 89 aa11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 TIMM8BQ9Y5J9 83 aaPredicted RBP11.82□□□□□ -0.52
PDLIM2-217ENST00000491330 IFNA5P01569 189 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 RPL12P30050 165 aaKnown RBP11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 RNF212Q495C1 297 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 ATG101Q9BSB4 218 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 MED28Q9H204 178 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 ALG5Q9Y673 324 aa11.81□□□□□ -0.52
PDLIM2-217ENST00000491330 CRXO43186 299 aaPredicted RBP11.8□□□□□ -0.52
PDLIM2-217ENST00000491330 ATP5G1P05496 136 aa11.8□□□□□ -0.52
PDLIM2-217ENST00000491330 ATP5G3P48201 142 aa11.8□□□□□ -0.52
PDLIM2-217ENST00000491330 CBY3A6NI87 242 aa11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 CLINT1Q14677 625 aa11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 RGS21Q2M5E4 152 aa11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 SAT2Q96F10 170 aaPredicted RBP11.79□□□□□ -0.52
PDLIM2-217ENST00000491330 SACSQ9NZJ4 4579 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 SNURFLB1AK76 121 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 F5H768 121 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 SNRPCP09234 159 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 ZNF266Q14584 549 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 TMEM263Q8WUH6 116 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 ODF3Q96PU9 254 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 MBD2Q9UBB5 411 aa11.78□□□□□ -0.52
PDLIM2-217ENST00000491330 GIPP09681 153 aaPredicted RBP11.77□□□□□ -0.53
PDLIM2-217ENST00000491330 TMEM88Q6PEY1 159 aa11.77□□□□□ -0.53
PDLIM2-217ENST00000491330 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
PDLIM2-217ENST00000491330 LYSTQ99698 3801 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 DNAH1Q9P2D7 4330 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 H3BTX0 84 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 TAS2R45P59539 299 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 LGALS9BQ3B8N2 356 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 MORN5Q5VZ52 161 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 LINC00477Q96M19 166 aa11.76□□□□□ -0.53
PDLIM2-217ENST00000491330 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
PDLIM2-217ENST00000491330 H3BQ15 152 aa11.75□□□□□ -0.53
PDLIM2-217ENST00000491330 CCL18P55774 89 aa11.75□□□□□ -0.53
PDLIM2-217ENST00000491330 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
PDLIM2-217ENST00000491330 FUT9Q9Y231 359 aa11.75□□□□□ -0.53
PDLIM2-217ENST00000491330 SLC17A3O00476 420 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 SLC25A5P05141 298 aaKnown RBP11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 CSN1S1P47710 185 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 TMEM78Q5T7P6 136 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 LYPD1Q8N2G4 141 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 AQP10Q96PS8 301 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 NOP10Q9NPE3 64 aaKnown RBP11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
PDLIM2-217ENST00000491330 NPIPB6E9PJ23 425 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 J3KRW8 73 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 M0R2N4 97 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 NUDT3O95989 172 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 AZU1P20160 251 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 FCN2Q15485 313 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 OR51M1Q9H341 326 aa11.73□□□□□ -0.53
PDLIM2-217ENST00000491330 NBEAP1P0C6P0 100 aa11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 GFI1BQ5VTD9 330 aa11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 INO80EQ8NBZ0 244 aaPredicted RBP11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 ZNF680Q8NEM1 530 aa11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 ALMS1Q8TCU4 4167 aa11.72□□□□□ -0.53
PDLIM2-217ENST00000491330 TRAV12-3A0A0B4J271 114 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 PRAC2D3DTV9 90 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 GPX1P07203 203 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 NMBP08949 121 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 M6PRP20645 277 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 OR5I1Q13606 314 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 FFAR4Q5NUL3 377 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 PQLC2Q6ZP29 291 aa11.71□□□□□ -0.53
PDLIM2-217ENST00000491330 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 936.7 ms