RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 M0R381 172 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 TCAPO15273 167 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 KLF5Q13887 457 aaPredicted RBP5.76□□□□□ -1.49
NPHP3-208ENST00000490993 Q5PR19 223 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 C8orf49Q96NF6 230 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 FANCD2OSQ96PS1 177 aa5.76□□□□□ -1.49
NPHP3-208ENST00000490993 DIDO1Q9BTC0 2240 aaKnown RBP5.75□□□□□ -1.49
NPHP3-208ENST00000490993 IGHV4-30-2A0A087WSY4 118 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 RNF223E7ERA6 249 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 SMAGPQ0VAQ4 97 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 KIR2DL4Q99706 377 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 ALKBH7Q9BT30 221 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-208ENST00000490993 H7C1H1 209 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 TCF21O43680 179 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 JMJD8Q96S16 334 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 USF3Q68DE3 2245 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 D6R8Y8 96 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 ARMS2P0C7Q2 107 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 MUC21Q5SSG8 566 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 LDLRAD2Q5SZI1 272 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 ZNF418Q8TF45 676 aaPredicted RBP5.75□□□□□ -1.49
NPHP3-208ENST00000490993 LENEPQ9Y5L5 61 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 IGLC2P0DOY2 106 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.49
NPHP3-208ENST00000490993 SLAQ13239 276 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 IL17RELQ6ZVW7 336 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 PIP4P2Q8N4L2 257 aa5.75□□□□□ -1.49
NPHP3-208ENST00000490993 C19orf84I3L1E1 186 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 ELANEP08246 267 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 ERCC8Q13216 396 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 IGFL4Q6B9Z1 124 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 ATOH7Q8N100 152 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 MS4A6AQ9H2W1 248 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 ST20Q9HBF5 79 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 PTPRBP23467 1997 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 COL27A1Q8IZC6 1860 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-208ENST00000490993 TRGV11A0A075B6L2 103 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 C3orf79P0CE67 100 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 CMC4P56277 68 aaPredicted RBP5.74□□□□□ -1.49
NPHP3-208ENST00000490993 C17orf77Q96MU5 243 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 MEGF9Q9H1U4 602 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 YAE1D1Q9NRH1 226 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 CHD3Q12873 2000 aaKnown RBP5.74□□□□□ -1.49
NPHP3-208ENST00000490993 A0A087X0K7 114 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 TMEM89A2RUT3 159 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 OVOL3O00110 214 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 NUTF2P61970 127 aaKnown RBP5.74□□□□□ -1.49
NPHP3-208ENST00000490993 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 FAM104BQ5XKR9 115 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 Q8N6K4 173 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 C1orf159Q96HA4 380 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 BRCA2P51587 3418 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 HTN1P15515 57 aa5.74□□□□□ -1.49
NPHP3-208ENST00000490993 PCNX1Q96RV3 2341 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 IGHV7-4-1A0A0J9YVY3 117 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 SMPXQ9UHP9 88 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 BUB3O43684 328 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 IGHV4-38-2P0DP08 117 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 NMUP48645 174 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 CTAG1AP78358 180 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 ZNF664Q8N3J9 261 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 RNF182Q8N6D2 247 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 CITED2Q99967 270 aaPredicted RBP5.73□□□□□ -1.49
NPHP3-208ENST00000490993 PLCE1Q9P212 2302 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 NPIPB6E9PJ23 425 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 ZNF56Q15929 161 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 C20orf144Q9BQM9 153 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 H3BVH4 76 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 IGLV2-8P01709 118 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 IGHG2P01859 326 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 CD7P09564 240 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 DEFB113Q30KQ7 82 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 FBLN7Q53RD9 439 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 VPREB3Q9UKI3 123 aa5.73□□□□□ -1.49
NPHP3-208ENST00000490993 COL6A6A6NMZ7 2263 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 DYNAPQ8N1N2 210 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 GLMPQ8WWB7 406 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 DPH3P1Q9H4G8 78 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 SYS1-DBNDD2H3BUS1 97 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 ESDP10768 282 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 PPIFP30405 207 aaKnown RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 MYCNOSP40205 109 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 FOXE3Q13461 319 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 CDSNQ15517 529 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 Q96MF0 132 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 VGLL1Q99990 258 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 POLR3KQ9Y2Y1 108 aaPredicted RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 C19orf71A6NCJ1 209 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 A6NDX4 124 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 CBY3A6NI87 242 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 IGKV3-20P01619 116 aa5.72□□□□□ -1.49
NPHP3-208ENST00000490993 ZNF25P17030 456 aaPredicted RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 HINT1P49773 126 aaPredicted RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 SRSF2Q01130 221 aaKnown RBP5.72□□□□□ -1.49
NPHP3-208ENST00000490993 DEFB112Q30KQ8 113 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms