RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 PSG3Q16557 428 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 SAPCD1Q5SSQ6 148 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 C16orf54Q6UWD8 224 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 Q6ZSV7 163 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 EXOC3-AS1Q8N2X6 119 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 WFDC12Q8WWY7 111 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 MRPL53Q96EL3 112 aaKnown RBP7.89□□□□□ -1.15
HDAC3-210ENST00000490808 UBE2E2Q96LR5 201 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 YPEL4Q96NS1 127 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 PYGO2Q9BRQ0 406 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 SRD5A3Q9H8P0 318 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 SERTAD4Q9NUC0 356 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 U3KQE9 123 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 TRRAPQ9Y4A5 3859 aa7.89□□□□□ -1.15
HDAC3-210ENST00000490808 A0A1W2PPQ1 181 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF320A2RRD8 509 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 RBAKDNA6NC62 111 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 PGPEP1LA6NFU8 196 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 DIRC3C9JPN6 131 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 IGHV3-11P01762 117 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 CT45A10P0DMU9 189 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 GNG5P63218 68 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 Q6ZS46 218 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 GOLT1AQ6ZVE7 132 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 TMEM183AQ8IXX5 376 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 OR4B1Q8NGF8 309 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 LINC01006Q8NI28 216 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF747Q9BV97 191 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-210ENST00000490808 DAZ1Q9NQZ3 744 aaKnown RBP7.88□□□□□ -1.15
HDAC3-210ENST00000490808 AURKAIP1Q9NWT8 199 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 RNF114Q9Y508 228 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
HDAC3-210ENST00000490808 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 TRAV34A0A0B4J273 112 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 A8MWL6 223 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 H3BTX0 84 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 K7EN84 100 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 M0QZ24 198 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 TYMSP04818 313 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
HDAC3-210ENST00000490808 LGALS1P09382 135 aaKnown RBP7.87□□□□□ -1.15
HDAC3-210ENST00000490808 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 C3orf56Q8N813 242 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 PSG8Q9UQ74 426 aa7.87□□□□□ -1.15
HDAC3-210ENST00000490808 IGHV7-4-1A0A0J9YVY3 117 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 LOC105371267A0A1B0GV96 52 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 XKRY2A2RUG3 117 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 LGALS9O00182 355 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 IGLV2-8P01709 118 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 P01737 135 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 CXCL1P09341 107 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 ID1P41134 155 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 CDX1P47902 265 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-210ENST00000490808 PROK1P58294 105 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 OR5I1Q13606 314 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 CT83Q5H943 113 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 WDR73Q6P4I2 378 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 Q86TA4 180 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 GBGT1Q8N5D6 347 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 LINC00479Q96M42 142 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 C17orf77Q96MU5 243 aa7.86□□□□□ -1.15
HDAC3-210ENST00000490808 SAV1Q9H4B6 383 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-210ENST00000490808 VWFP04275 2813 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 FAM231BA6NCW3 169 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 ZNF207O43670 478 aaKnown RBP7.85□□□□□ -1.15
HDAC3-210ENST00000490808 TMEM95Q3KNT9 176 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 PRR27Q6MZM9 219 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 RASL11AQ6T310 242 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 REC114Q7Z4M0 266 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 KLHDC1Q8N7A1 406 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 MYOZ3Q8TDC0 251 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 GLMPQ8WWB7 406 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 MLST8Q9BVC4 326 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 SMAD5-AS1Q9Y6J3 95 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 V9GYV3 84 aa7.85□□□□□ -1.15
HDAC3-210ENST00000490808 NOTCH3Q9UM47 2321 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 IZUMO1RA6ND01 250 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 SLC17A3O00476 420 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 CHEK1O14757 476 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 MT-ND6P03923 174 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 RPLP1P05386 114 aaKnown RBP7.84□□□□□ -1.15
HDAC3-210ENST00000490808 RPL11P62913 178 aaKnown RBP7.84□□□□□ -1.15
HDAC3-210ENST00000490808 TMEM78Q5T7P6 136 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 LCN12Q6JVE5 192 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 NUDT10Q8NFP7 164 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 TSKUQ8WUA8 353 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 DPF1Q92782 380 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 NUDT11Q96G61 164 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 RHPN1-AS1Q9BWJ2 59 aa7.84□□□□□ -1.15
HDAC3-210ENST00000490808 GFRA4Q9GZZ7 299 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms