RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 CST9LP1Q5W188 147 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 S100A7AQ86SG5 101 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 GPHB5Q86YW7 130 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 TMEM190Q8WZ59 177 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 METTL26Q96S19 204 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 C20orf24Q9BUV8 137 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 SLC35B3Q9H1N7 401 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 U3KQK5 164 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 ARL2-SNX15V9GYD0 113 aa5.71□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV3-49A0A0A0MS15 119 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 A0A1W2PRE2 83 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 F8W036 122 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 H3BTX0 84 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 BUB3O43684 328 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 SAP30O75446 220 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 SNRPCP09234 159 aaKnown RBP5.7□□□□□ -1.5
CLDN1-202ENST00000490800 NBEAP1P0C6P0 100 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 IGLC2P0DOY2 106 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 HIST1H1EP10412 219 aaKnown RBP5.7□□□□□ -1.5
CLDN1-202ENST00000490800 NPPCP23582 126 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 S100A7P31151 101 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 RPEL1Q2QD12 228 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 BPIFA4PQ86YQ2 179 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 CCDC28AQ8IWP9 274 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 CYB561D1Q8N8Q1 229 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 BLNKQ8WV28 456 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 TXNDC17Q9BRA2 123 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF586Q9NXT0 402 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 CARHSP1Q9Y2V2 147 aaKnown RBP5.7□□□□□ -1.5
CLDN1-202ENST00000490800 SMAD5-AS1Q9Y6J3 95 aa5.7□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV3OR16-13A0A075B7E8 117 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV3-74A0A0B4J1X5 117 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV3-66A0A0C4DH42 116 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF320A2RRD8 509 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 GGTLC3B5MD39 225 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 F6UZH7 168 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 TMEM250H0YL14 139 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 K7EMT4 169 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 NDUFB4O95168 129 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
CLDN1-202ENST00000490800 FAM106AQ4KMX7 169 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 SOHLH1Q5JUK2 328 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 C1orf194Q5T5A4 169 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 FAM90A2PQ658T7 463 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 C16orf54Q6UWD8 224 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 SBSPONQ8IVN8 264 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 OR8I2Q8N0Y5 310 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 C17orf77Q96MU5 243 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 SEC11CQ9BY50 192 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
CLDN1-202ENST00000490800 HUWE1Q7Z6Z7 4374 aaKnown RBP5.69□□□□□ -1.5
CLDN1-202ENST00000490800 TRBV19A0A075B6N1 114 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 A0A087X0K7 114 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 IGHV7-4-1A0A0J9YVY3 117 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 LGALS9O00182 355 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 PDE6DO43924 150 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 APOC3P02656 99 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 EDN2P20800 178 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 CEBPGP53567 150 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 RANP62826 216 aaKnown RBP5.68□□□□□ -1.5
CLDN1-202ENST00000490800 KLF5Q13887 457 aaPredicted RBP5.68□□□□□ -1.5
CLDN1-202ENST00000490800 GUCA2BQ16661 112 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 GLMPQ8WWB7 406 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 C11orf52Q96A22 123 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 GPR82Q96P67 336 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 ELOVL1Q9BW60 279 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 NKX6-2Q9C056 277 aaPredicted RBP5.68□□□□□ -1.5
CLDN1-202ENST00000490800 Q9H3A6 140 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 DAZ1Q9NQZ3 744 aaKnown RBP5.68□□□□□ -1.5
CLDN1-202ENST00000490800 OTORQ9NRC9 128 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 UFC1Q9Y3C8 167 aa5.68□□□□□ -1.5
CLDN1-202ENST00000490800 TMEM213A2RRL7 107 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 PGPA6NDG6 321 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 PRSS29PA6NIE9 313 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 A8MWP6 167 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 SLC17A3O00476 420 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 FRMD6-AS1P0C7T7 363 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 GALR1P47211 349 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 SYNJ2BPP57105 145 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 PDE6HQ13956 83 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 SIGLEC15Q6ZMC9 328 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 EXOC3-AS1Q8N2X6 119 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 RPUSD4Q96CM3 377 aaKnown RBP5.67□□□□□ -1.5
CLDN1-202ENST00000490800 RHPN1-AS1Q9BWJ2 59 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 SMPXQ9UHP9 88 aa5.67□□□□□ -1.5
CLDN1-202ENST00000490800 A0A1W2PS18 150 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 C2orf70A6NJV1 201 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 PEX7O00628 323 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 CHEK1O14757 476 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF253O75346 499 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 SLC25A5P05141 298 aaKnown RBP5.66□□□□□ -1.5
CLDN1-202ENST00000490800 GNG5P63218 68 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 ZNF674Q2M3X9 581 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 FAM74A3Q4VXF1 159 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 ATRAIDQ6UW56 229 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 LYPD1Q8N2G4 141 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 C2CD4CQ8TF44 421 aa5.66□□□□□ -1.5
CLDN1-202ENST00000490800 GRAMD2BQ96HH9 432 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms