RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ORMDL3Q8N138 153 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 PDE6HQ13956 83 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 SIRPDQ9H106 197 aa11.39□□□□□ -0.59
ARHGEF39-205ENST00000490638 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 TTC9CQ8N5M4 171 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 VPS13AQ96RL7 3174 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 A0A1B0GW15 77 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 H3BUA1 57 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 DEFB130BP0DP73 79 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 DEFB130AP0DP74 79 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 HOXD3P31249 432 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 Q8N9W7 124 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 IMMP2LQ96T52 175 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 DIRC3C9JPN6 131 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 OR4C5Q8NGB2 326 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
ARHGEF39-205ENST00000490638 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 IGHV3-53P01767 116 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 RNF182Q8N6D2 247 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 FNDC4Q9H6D8 234 aaPredicted RBP11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 F8P00451 2351 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 GZMBP10144 247 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 ZNF415Q09FC8 603 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 SPINK13Q1W4C9 94 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 C1QL4Q86Z23 238 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 DERL1Q9BUN8 251 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 IZUMO1RA6ND01 250 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 F2Z2F3 143 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 NMUP48645 174 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 PRSS57Q6UWY2 283 aa11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
ARHGEF39-205ENST00000490638 REV3LO60673 3130 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 FOLR2P14207 255 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 LYL1P12980 280 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 SRSF3P84103 164 aaKnown RBP11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 PRSS2P07478 247 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 LGALS1P09382 135 aaKnown RBP11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 OR10J3Q5JRS4 329 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 NUDT10Q8NFP7 164 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
ARHGEF39-205ENST00000490638 LINC00479Q96M42 142 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 PAM16Q9Y3D7 125 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 ERCC8Q13216 396 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 RITA1Q96K30 269 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 SSBP4Q9BWG4 385 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 FOXE3Q13461 319 aa11.35□□□□□ -0.59
ARHGEF39-205ENST00000490638 A0A087WX48 190 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 ST20Q9HBF5 79 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 CACNG7P62955 275 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 C5orf56Q8N8D9 126 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 NPBQ8NG41 125 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 PARD6GQ9BYG4 376 aaPredicted RBP11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 TSKUQ8WUA8 353 aa11.34□□□□□ -0.59
ARHGEF39-205ENST00000490638 UBE2DNLQ8IWF7 75 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 KIAA1549Q9HCM3 1950 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 IGHV4-31P0DP07 118 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 ZNF491Q8N8L2 437 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 INAFM1C9JVW0 142 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 TNFRSF13BO14836 293 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 SMPXQ9UHP9 88 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
ARHGEF39-205ENST00000490638 TRBV19A0A075B6N1 114 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 OR9G4Q8NGQ1 327 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 ANKRD17O75179 2603 aaKnown RBP11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 CLPSL1A2RUU4 121 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 COTL1Q14019 142 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 VAMP3Q15836 100 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 SLURP1P55000 103 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 C11orf71Q6IPW1 123 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 LINC01551Q86U37 167 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 BBC3Q96PG8 261 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
ARHGEF39-205ENST00000490638 RPL36AP83881 106 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 RPL36ALQ969Q0 106 aaKnown RBP11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 COL5A1P20908 1838 aaPredicted RBP11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 AMBPP02760 352 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 PPBPP02775 128 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 TRAV9-1A0A075B6T8 112 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 C7orf71A4D174 169 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 SH2D1AO60880 128 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 MEIG1Q5JSS6 88 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 A0A087WWC5 75 aa11.31□□□□□ -0.6
ARHGEF39-205ENST00000490638 PKIAP61925 76 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 SPTBN5Q9NRC6 3674 aaKnown RBP11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
ARHGEF39-205ENST00000490638 LYZL1Q6UWQ5 148 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms