RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 EBLN2Q6P2I7 272 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 TRPT1Q86TN4 253 aaKnown RBP9.21□□□□□ -0.94
HDAC1-210ENST00000490081 APRG1Q8IVJ8 170 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 RPUSD4Q96CM3 377 aaKnown RBP9.21□□□□□ -0.94
HDAC1-210ENST00000490081 TUBA4BQ9H853 241 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 SRD5A3Q9H8P0 318 aa9.21□□□□□ -0.94
HDAC1-210ENST00000490081 LOC102724200A0A096LPH7 203 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 RBAKDNA6NC62 111 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 RBMY1BA6NDE4 496 aaKnown RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 RBMY1EA6NEQ0 496 aaKnown RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 UBE2CO00762 179 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 IFNA7P01567 189 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 SLC25A5P05141 298 aaKnown RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 RBMY1DP0C7P1 496 aaKnown RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 IGFL4Q6B9Z1 124 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
HDAC1-210ENST00000490081 ALKAL2Q6UX46 152 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 RNF182Q8N6D2 247 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 ZNF680Q8NEM1 530 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 MRAPQ8TCY5 172 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 TCEAL7Q9BRU2 100 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 WFDC10AQ9H1F0 79 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 Q9H3A6 140 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
HDAC1-210ENST00000490081 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 PGPA6NDG6 321 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 H3BTX0 84 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 EIF3GO75821 320 aaKnown RBP eCLIP9.19□□□□□ -0.94
HDAC1-210ENST00000490081 SNRPCP09234 159 aaKnown RBP9.19□□□□□ -0.94
HDAC1-210ENST00000490081 FRMD6-AS1P0C7T7 363 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 ICAM4Q14773 271 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 STHQ8IWL8 128 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 EXOC3-AS1Q8N2X6 119 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 ZNF738Q8NE65 137 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 TXNDC17Q9BRA2 123 aa9.19□□□□□ -0.94
HDAC1-210ENST00000490081 TRBV7-9A0A0J9YWB2 115 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 FAM74A7A6NL05 159 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 KNCNA6PVL3 124 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 ZNF705EA8MWA4 302 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-210ENST00000490081 HLA-DMBP28068 263 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 CSN1S1P47710 185 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 APOC4P55056 127 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 FGF8P55075 233 aaPredicted RBP9.18□□□□□ -0.94
HDAC1-210ENST00000490081 NUTF2P61970 127 aaKnown RBP9.18□□□□□ -0.94
HDAC1-210ENST00000490081 ZNF124Q15973 351 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 DEFB121Q5J5C9 76 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 ACTL10Q5JWF8 245 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 C9orf47Q6ZRZ4 202 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 C5orf17Q8NAS9 161 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 LINC00477Q96M19 166 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 B9D2Q9BPU9 175 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 TMPRSS5Q9H3S3 457 aa9.18□□□□□ -0.94
HDAC1-210ENST00000490081 FBLL1A6NHQ2 334 aaKnown RBP9.17□□□□□ -0.94
HDAC1-210ENST00000490081 ZNF705FA8MVS1 300 aaPredicted RBP9.17□□□□□ -0.94
HDAC1-210ENST00000490081 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 NPIPB6E9PJ23 425 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 M0R3E3 92 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 TAGLN2P37802 199 aaKnown RBP9.17□□□□□ -0.94
HDAC1-210ENST00000490081 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 AMTNQ6UX39 209 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 CCDC28AQ8IWP9 274 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 OR10J6PQ8NGY7 276 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 MANBALQ9NQG1 85 aa9.17□□□□□ -0.94
HDAC1-210ENST00000490081 GGTLC3B5MD39 225 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 PRAC2D3DTV9 90 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 NDUFS6O75380 124 aaKnown RBP9.16□□□□□ -0.94
HDAC1-210ENST00000490081 AMBPP02760 352 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 NMBP08949 121 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 CNN1P51911 297 aaKnown RBP9.16□□□□□ -0.94
HDAC1-210ENST00000490081 SUMO1P63165 101 aaKnown RBP9.16□□□□□ -0.94
HDAC1-210ENST00000490081 CCL20P78556 96 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 HAGHQ16775 308 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 Q6ZWC4 215 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 CMTM2Q8TAZ6 248 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 HIST1H2BAQ96A08 127 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 C1QTNF4Q9BXJ3 329 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 EPDR1Q9UM22 224 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 YTHDF2Q9Y5A9 579 aaKnown RBP9.16□□□□□ -0.94
HDAC1-210ENST00000490081 LENEPQ9Y5L5 61 aa9.16□□□□□ -0.94
HDAC1-210ENST00000490081 F6UB75 175 aa9.15□□□□□ -0.94
HDAC1-210ENST00000490081 NHLRC4P0CG21 123 aaPredicted RBP9.15□□□□□ -0.94
HDAC1-210ENST00000490081 FAM19A4Q96LR4 140 aa9.15□□□□□ -0.94
HDAC1-210ENST00000490081 TP53TG1Q9Y2A0 90 aa9.15□□□□□ -0.94
HDAC1-210ENST00000490081 F6UZH7 168 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 K7EQM0 130 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 PAGE4O60829 102 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 TCRAP04437 139 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
HDAC1-210ENST00000490081 DEFB1P60022 68 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 ZNF767PQ75MW2 155 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 IQCF2Q8IXL9 164 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 TM2D3Q9BRN9 247 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 AGPAT4-IT1Q9H0P7 198 aa9.14□□□□□ -0.95
HDAC1-210ENST00000490081 IFNA1P01562 189 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms