RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 EML5Q05BV3 1969 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 APOC4P55056 127 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 B3GALT5-AS1P59052 145 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 TMEM158Q8WZ71 300 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 PFN1P07737 140 aaKnown RBP7.18□□□□□ -1.26
LSAMP-205ENST00000490035 SRD5A1P18405 259 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 FGFBP3Q8TAT2 258 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 CEACAM8P31997 349 aaPredicted RBP7.18□□□□□ -1.26
LSAMP-205ENST00000490035 RPL15P61313 204 aaKnown RBP7.18□□□□□ -1.26
LSAMP-205ENST00000490035 RNF152Q8N8N0 203 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 NDUFA4L2Q9NRX3 87 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 GAGE12BA1L429 117 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 H3BUX3 64 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 PINLYPA6NC86 204 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 ARHGAP21Q5T5U3 1957 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 IGKV3D-20A0A0C4DH25 116 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 NDUFA4O00483 81 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 PMVKQ15126 192 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 EDA2RQ9HAV5 297 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 A0A1W2PRX2 142 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 TNFRSF6BO95407 300 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 KIR3DS1Q14943 382 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 PRIMA1Q86XR5 153 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 PYGO2Q9BRQ0 406 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 LSM4Q9Y4Z0 139 aaKnown RBP7.18□□□□□ -1.26
LSAMP-205ENST00000490035 COX11Q9Y6N1 276 aa7.18□□□□□ -1.26
LSAMP-205ENST00000490035 CD33P20138 364 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 Q8N8P6 123 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 IGKV1D-17A0A075B6S4 117 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 MALRD1Q5VYJ5 2156 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 EFNA2O43921 213 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
LSAMP-205ENST00000490035 TRAV5A0A0B4J249 113 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 SOCS3O14543 225 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 C1orf122Q6ZSJ8 110 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 LGALS9BQ3B8N2 356 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 RHPN1-AS1Q9BWJ2 59 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 TRAV13-2A0A0B4J235 113 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 LINC00473A8K010 186 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 A8MWP6 167 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 SPXQ9BT56 116 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 VSIRQ9H7M9 311 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 PLXNB1O43157 2135 aa7.17□□□□□ -1.26
LSAMP-205ENST00000490035 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-205ENST00000490035 PSCAO43653 123 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 MRPL53Q96EL3 112 aaKnown RBP7.16□□□□□ -1.26
LSAMP-205ENST00000490035 SELLP14151 372 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 TEX36Q5VZQ5 186 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 KLHL30-AS1Q8NEE0 82 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 RBAKDNA6NC62 111 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 SAA4P35542 130 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 CACNA1GO43497 2377 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 ATP6V0BQ99437 205 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 SMIM27A0A1W2PRY6 76 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 UBE2WQ96B02 151 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 TRAV8-1A0A0A6YYK1 113 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 FCN3O75636 299 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 C10orf91Q5T1B1 145 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
LSAMP-205ENST00000490035 MSMBP08118 114 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 LURAP1LQ8IV03 231 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 KAAG1Q9UBP8 84 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 A0A1W2PPI3 338 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 PPIFP30405 207 aaKnown RBP7.15□□□□□ -1.26
LSAMP-205ENST00000490035 MED12LQ86YW9 2145 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
LSAMP-205ENST00000490035 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.26
LSAMP-205ENST00000490035 IGHV3OR16-8A0A075B7F1 116 aa7.15□□□□□ -1.27
LSAMP-205ENST00000490035 TANC2Q9HCD6 1990 aa7.15□□□□□ -1.27
LSAMP-205ENST00000490035 TEX48A0A1B0GUV7 120 aa7.15□□□□□ -1.27
LSAMP-205ENST00000490035 MSRB2Q9Y3D2 182 aa7.15□□□□□ -1.27
LSAMP-205ENST00000490035 ZNF48Q96MX3 618 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-205ENST00000490035 THAP8Q8NA92 274 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 LINC01619G3V211 115 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 HERVK_113P63121 156 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 GAGE1Q13065 139 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 POU2AF1Q16633 256 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 C14orf178Q8N769 122 aaPredicted RBP7.14□□□□□ -1.27
LSAMP-205ENST00000490035 K7EM74 188 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 CDKN1BP46527 198 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 RHOHQ15669 191 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 TMEM256Q8N2U0 113 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 ZNF561-AS1K7EIQ3 104 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 ARMS2P0C7Q2 107 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 GFI1BQ5VTD9 330 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 TRBV19A0A075B6N1 114 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
LSAMP-205ENST00000490035 EREGO14944 169 aa7.13□□□□□ -1.27
LSAMP-205ENST00000490035 CD24P25063 80 aa7.13□□□□□ -1.27
LSAMP-205ENST00000490035 RPL32P62910 135 aaKnown RBP7.13□□□□□ -1.27
LSAMP-205ENST00000490035 SH2D6Q7Z4S9 175 aa7.13□□□□□ -1.27
LSAMP-205ENST00000490035 C9orf118A6NHY6 69 aa7.13□□□□□ -1.27
LSAMP-205ENST00000490035 E9PQ18 207 aa7.13□□□□□ -1.27
LSAMP-205ENST00000490035 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms