RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 ADAT1Q9BUB4 502 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 RTL8AQ9BWD3 113 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 EBPLQ9BY08 206 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 MRPL32Q9BYC8 188 aaKnown RBP1.45□□□□□ -2.18
HMGN1-218ENST00000490032 OR2H1Q9GZK4 316 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 COMMD5Q9GZQ3 224 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 AICDAQ9GZX7 198 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 PBOV1Q9GZY1 135 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 GTSF1LQ9H1H1 148 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 TMEM167BQ9NRX6 74 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 IL36BQ9NZH7 164 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 SLC23A2Q9UGH3 650 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 HS3ST2Q9Y278 367 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 COL6A3P12111 3177 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 NUP205Q92621 2012 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 ZSWIM8A7E2V4 1837 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LTBP2Q14767 1821 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 PARP14Q460N5 1801 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 FOCADQ5VW36 1801 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 LAMA3Q16787 3333 aa1.45□□□□□ -2.18
HMGN1-218ENST00000490032 MKI67P46013 3256 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 HTTP42858 3142 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CACNA1HO95180 2353 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 TICRRQ7Z2Z1 1910 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 DOCK6Q96HP0 2047 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 KMT2EQ8IZD2 1858 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ARAP2Q8WZ64 1704 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 EPG5Q9HCE0 2579 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A0A087WUU8 490 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A0A0J9YY10 115 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CENPVL3A0A0U1RRI6 287 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LOC102725191A0A1B0GVB3 256 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1B0GX78 115 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1W2PPE3 182 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A0A1W2PPM0 123 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF860A6NHJ4 632 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CPSF4LA6NMK7 179 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CEACAM18A8MTB9 384 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A8MWL6 223 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 A8MWV9 139 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 GGTLC3B5MD39 225 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 FNDC10F2Z333 226 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 H3BUT2 72 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 K7EP34 96 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SDCBPO00560 298 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PLPP3O14495 311 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 UQCRQO14949 82 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 TIMM8AO60220 97 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SSSCA1O60232 199 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 YPEL1O60688 119 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 KLF7O75840 302 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 APOMO95445 188 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 GPR75O95800 540 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 NCR2O95944 276 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PPP1R17O96001 155 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 C1QAP02745 245 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SLC25A5P05141 298 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CXCL1P09341 107 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ASAH2BP0C7U1 165 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF688P0C7X2 276 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 HMGA1P17096 107 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 APLNRP35414 380 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LPAR6P43657 344 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SEC61GP60059 68 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 HSPE1P61604 102 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 UBE2L3P68036 154 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PRDX1Q06830 199 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PPP1R1AQ13522 171 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 OR8B8Q15620 311 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 Q56UQ5 140 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 S100A7L2Q5SY68 101 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 AMTNQ6UX39 209 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ATP5L2Q7Z4Y8 100 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 OOSP2Q86WS3 158 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PDPNQ86YL7 162 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LRRC25Q8N386 305 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SMIM20Q8N5G0 67 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ZFP41Q8N8Y5 198 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 C15orf53Q8NAA6 179 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 OR8B12Q8NGG6 310 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 OR10D3Q8NH80 312 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 OR10G6Q8NH81 332 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CLDND2Q8NHS1 167 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 MYOZ3Q8TDC0 251 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LSM10Q969L4 123 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 C8orf44Q96CB5 159 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SLC25A44Q96H78 314 aaPredicted RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 KCNS1Q96KK3 526 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 Q96M85 177 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 ZNF681Q96N22 645 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 NMNAT3Q96T66 252 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PRADC1Q9BSG0 188 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 MRPL20Q9BYC9 149 aaKnown RBP1.44□□□□□ -2.18
HMGN1-218ENST00000490032 SH3BGRL3Q9H299 93 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 LYRM4Q9HD34 91 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 DYNLRB1Q9NP97 96 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PRSS16Q9NQE7 514 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PRTFDC1Q9NRG1 225 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 CA10Q9NS85 328 aa1.44□□□□□ -2.18
HMGN1-218ENST00000490032 PSENENQ9NZ42 101 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms