RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 CSPG4Q6UVK1 2322 aa20.42■□□□□ 0.86
KCNC4-207ENST00000489935 SERTM2A0A1B0GWG4 89 aa20.42■□□□□ 0.86
KCNC4-207ENST00000489935 GATA3P23771 443 aa20.42■□□□□ 0.86
KCNC4-207ENST00000489935 HBBP68871 147 aa20.42■□□□□ 0.86
KCNC4-207ENST00000489935 ARL6IP6Q8N6S5 226 aa20.42■□□□□ 0.86
KCNC4-207ENST00000489935 IGHV3OR16-13A0A075B7E8 117 aa20.41■□□□□ 0.86
KCNC4-207ENST00000489935 IGHV3-74A0A0B4J1X5 117 aa20.41■□□□□ 0.86
KCNC4-207ENST00000489935 ZNF705FA8MVS1 300 aaPredicted RBP20.41■□□□□ 0.86
KCNC4-207ENST00000489935 ZNF207O43670 478 aaKnown RBP20.41■□□□□ 0.86
KCNC4-207ENST00000489935 PPIFP30405 207 aaKnown RBP20.41■□□□□ 0.86
KCNC4-207ENST00000489935 POLQO75417 2590 aa20.41■□□□□ 0.86
KCNC4-207ENST00000489935 RAB9AP51151 201 aa20.41■□□□□ 0.86
KCNC4-207ENST00000489935 RELQ04864 619 aaPredicted RBP20.41■□□□□ 0.86
KCNC4-207ENST00000489935 LINC01356Q8N9X3 169 aa20.41■□□□□ 0.86
KCNC4-207ENST00000489935 A0A087X0K7 114 aa20.4■□□□□ 0.86
KCNC4-207ENST00000489935 EPG5Q9HCE0 2579 aa20.39■□□□□ 0.86
KCNC4-207ENST00000489935 IGHV3-49A0A0A0MS15 119 aa20.39■□□□□ 0.86
KCNC4-207ENST00000489935 FOXA3P55318 350 aaPredicted RBP20.39■□□□□ 0.86
KCNC4-207ENST00000489935 Q6ZWC4 215 aa20.39■□□□□ 0.86
KCNC4-207ENST00000489935 MAPK1IP1LQ8NDC0 245 aa20.39■□□□□ 0.86
KCNC4-207ENST00000489935 ATP6V0BQ99437 205 aa20.39■□□□□ 0.86
KCNC4-207ENST00000489935 CENPEQ02224 2701 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 A8MWP6 167 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 CD33P20138 364 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 KRTAP10-9P60411 292 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 C18orf32Q8TCD1 76 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 VGLL1Q99990 258 aa20.39■□□□□ 0.85
KCNC4-207ENST00000489935 USP9YO00507 2555 aaPredicted RBP20.38■□□□□ 0.85
KCNC4-207ENST00000489935 IQCJQ1A5X6 159 aa20.38■□□□□ 0.85
KCNC4-207ENST00000489935 LCN12Q6JVE5 192 aa20.38■□□□□ 0.85
KCNC4-207ENST00000489935 METTL26Q96S19 204 aa20.38■□□□□ 0.85
KCNC4-207ENST00000489935 U3KQE9 123 aa20.38■□□□□ 0.85
KCNC4-207ENST00000489935 A0A1W2PS18 150 aa20.37■□□□□ 0.85
KCNC4-207ENST00000489935 M0QZK8 103 aa20.37■□□□□ 0.85
KCNC4-207ENST00000489935 ALKBH7Q9BT30 221 aaPredicted RBP20.37■□□□□ 0.85
KCNC4-207ENST00000489935 TRBV12-3P01733 135 aa20.37■□□□□ 0.85
KCNC4-207ENST00000489935 PRO1933Q9H354 126 aa20.37■□□□□ 0.85
KCNC4-207ENST00000489935 GPX1P07203 203 aa20.36■□□□□ 0.85
KCNC4-207ENST00000489935 C1orf194Q5T5A4 169 aa20.36■□□□□ 0.85
KCNC4-207ENST00000489935 PRR25Q96S07 402 aa20.36■□□□□ 0.85
KCNC4-207ENST00000489935 SAMD10Q9BYL1 202 aa20.36■□□□□ 0.85
KCNC4-207ENST00000489935 KLK15Q9H2R5 256 aa20.36■□□□□ 0.85
KCNC4-207ENST00000489935 SCGB1D1O95968 90 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 ARL3P36405 182 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 COX8CQ7Z4L0 72 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 RNF182Q8N6D2 247 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 Q8TAT8 98 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 BRI3O95415 125 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 CT45A10P0DMU9 189 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 PKIAP61925 76 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 KCNS1Q96KK3 526 aa20.35■□□□□ 0.85
KCNC4-207ENST00000489935 PRAC2D3DTV9 90 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 HAX1O00165 279 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 KLF5Q13887 457 aaPredicted RBP20.34■□□□□ 0.85
KCNC4-207ENST00000489935 SAPCD1Q5SSQ6 148 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 TGFAP01135 160 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 DEFB112Q30KQ8 113 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 ZNF664Q8N3J9 261 aa20.34■□□□□ 0.85
KCNC4-207ENST00000489935 H3BUA1 57 aa20.33■□□□□ 0.84
KCNC4-207ENST00000489935 SH2D1AO60880 128 aa20.33■□□□□ 0.84
KCNC4-207ENST00000489935 SIGLECL1Q8N7X8 197 aa20.33■□□□□ 0.84
KCNC4-207ENST00000489935 FBLL1A6NHQ2 334 aaKnown RBP20.32■□□□□ 0.84
KCNC4-207ENST00000489935 NAGKQ9UJ70 344 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 PTPN13Q12923 2485 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 RNF223E7ERA6 249 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 IGHV3-11P01762 117 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 ARMS2P0C7Q2 107 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 ERCC8Q13216 396 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 USMG5Q96IX5 58 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 SLC50A1Q9BRV3 221 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 RNF114Q9Y508 228 aa20.32■□□□□ 0.84
KCNC4-207ENST00000489935 TRAV8-2A0A0B4J237 113 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 PF4V1P10720 104 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 ZNF80P51504 273 aaPredicted RBP20.31■□□□□ 0.84
KCNC4-207ENST00000489935 CTAG1AP78358 180 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 FAM162BQ5T6X4 162 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 UNQ9165/PRO28630Q6UXU0 137 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 LCNL1Q6ZST4 164 aa20.31■□□□□ 0.84
KCNC4-207ENST00000489935 IGHV4-59P01825 116 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 ZANQ9Y493 2812 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP20.3■□□□□ 0.84
KCNC4-207ENST00000489935 A0A1B0GUT8 65 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 J3QLI3 93 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 IGLV1-40P01703 118 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 PMCHP20382 165 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 AMTP48728 403 aa20.3■□□□□ 0.84
KCNC4-207ENST00000489935 ZNF324O75467 553 aaPredicted RBP20.29■□□□□ 0.84
KCNC4-207ENST00000489935 FAM19A2Q8N3H0 131 aa20.29■□□□□ 0.84
KCNC4-207ENST00000489935 CR1P17927 2039 aa20.29■□□□□ 0.84
KCNC4-207ENST00000489935 TMEM189A5PLL7 270 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 CFHR3Q02985 330 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 LOXL1Q08397 574 aaPredicted RBP20.28■□□□□ 0.84
KCNC4-207ENST00000489935 TMSB15BA0A087X1C1 80 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 TSTD3H0UI37 97 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 C8orf86Q6ZUL3 223 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 NRN1Q9NPD7 142 aa20.28■□□□□ 0.84
KCNC4-207ENST00000489935 NDUFA4O00483 81 aa20.27■□□□□ 0.84
KCNC4-207ENST00000489935 OR4X2Q8NGF9 303 aa20.27■□□□□ 0.84
KCNC4-207ENST00000489935 SMAD7O15105 426 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms